Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AL121956.5-201ENST00000625261 221 ntBASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AP002008.2-201ENST00000635926 4870 ntBASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 GOLGA2P9-201ENST00000596977 1937 ntBASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 MAPT-IT1-201ENST00000624111 3016 ntBASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 ZNF226-204ENST00000454662 2605 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LCE3DQ9BYE3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms