Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 SPDYE7P-202ENST00000420373 878 ntBASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 RN7SL618P-201ENST00000477850 296 ntBASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 SDHAP3-202ENST00000515467 728 ntBASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 AC051619.7-201ENST00000568314 623 ntBASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 AC007326.2-201ENST00000624224 7579 ntBASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 NUTM2HP-201ENST00000442076 2498 ntBASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GABARAPL3Q9BY60 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 HSPA8P5-201ENST00000456928 2069 ntBASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 CEND1P1-201ENST00000451006 455 ntBASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 HLA-V-204ENST00000476601 1289 ntBASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 KRT126P-201ENST00000549467 1181 ntBASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 MTDHP5-201ENST00000598980 586 ntBASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GABARAPL3Q9BY60 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms