Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC21.92■■□□□ 1.1
SCAPERQ9BY12 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
SCAPERQ9BY12 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 ZNF436-AS1-201ENST00000335648 2547 ntBASIC21.91■■□□□ 1.1
SCAPERQ9BY12 RNVU1-8-201ENST00000364272 125 ntBASIC21.91■■□□□ 1.1
SCAPERQ9BY12 ACTG1P19-201ENST00000418987 1116 ntBASIC21.91■■□□□ 1.1
SCAPERQ9BY12 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 AC026470.1-201ENST00000478038 846 ntBASIC21.91■■□□□ 1.1
SCAPERQ9BY12 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 ABHD17AP9-201ENST00000561925 548 ntBASIC21.91■■□□□ 1.1
SCAPERQ9BY12 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 MIR6746-201ENST00000620971 63 ntBASIC21.91■■□□□ 1.1
SCAPERQ9BY12 ST5-261ENST00000626808 1071 ntTSL 5 BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 AC112693.3-201ENST00000624819 1983 ntBASIC21.91■■□□□ 1.1
SCAPERQ9BY12 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
SCAPERQ9BY12 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 AC098934.1-203ENST00000442868 1262 ntBASIC21.9■■□□□ 1.1
SCAPERQ9BY12 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 RN7SL564P-201ENST00000496309 250 ntBASIC21.9■■□□□ 1.1
SCAPERQ9BY12 IGHV1-12-201ENST00000518307 205 ntBASIC21.9■■□□□ 1.1
SCAPERQ9BY12 NAA40-205ENST00000539656 577 ntTSL 4 BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 AP005212.2-201ENST00000584979 510 ntBASIC21.9■■□□□ 1.1
SCAPERQ9BY12 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 MME-218ENST00000625667 363 ntTSL 5 BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 KHSRPP1-201ENST00000427983 1768 ntBASIC21.9■■□□□ 1.1
SCAPERQ9BY12 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCAPERQ9BY12 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SCAPERQ9BY12 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
SCAPERQ9BY12 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
SCAPERQ9BY12 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
SCAPERQ9BY12 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SCAPERQ9BY12 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC21.89■■□□□ 1.1
SCAPERQ9BY12 SCARNA12-201ENST00000459155 270 ntBASIC21.89■■□□□ 1.1
SCAPERQ9BY12 RN7SL582P-201ENST00000491078 279 ntBASIC21.89■■□□□ 1.1
SCAPERQ9BY12 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC21.89■■□□□ 1.1
SCAPERQ9BY12 OR2A1-AS1-210ENST00000496968 531 ntBASIC21.89■■□□□ 1.1
SCAPERQ9BY12 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC21.89■■□□□ 1.1
SCAPERQ9BY12 SRP14-204ENST00000558720 780 ntTSL 2 BASIC21.89■■□□□ 1.1
SCAPERQ9BY12 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC21.89■■□□□ 1.1
SCAPERQ9BY12 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
SCAPERQ9BY12 AGGF1P1-201ENST00000509500 2073 ntBASIC21.89■■□□□ 1.1
SCAPERQ9BY12 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
SCAPERQ9BY12 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SCAPERQ9BY12 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC21.89■■□□□ 1.1
SCAPERQ9BY12 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SCAPERQ9BY12 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SCAPERQ9BY12 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCAPERQ9BY12 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
SCAPERQ9BY12 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCAPERQ9BY12 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCAPERQ9BY12 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCAPERQ9BY12 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC21.89■■□□□ 1.09
SCAPERQ9BY12 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCAPERQ9BY12 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
SCAPERQ9BY12 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SCAPERQ9BY12 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC21.89■■□□□ 1.09
SCAPERQ9BY12 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC21.89■■□□□ 1.09
SCAPERQ9BY12 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC21.89■■□□□ 1.09
SCAPERQ9BY12 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC21.89■■□□□ 1.09
SCAPERQ9BY12 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms