Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 REXO1L4P-201ENST00000605109 1937 ntBASIC13.76□□□□□ -0.21
SNX18Q96RF0 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 AC073869.1-201ENST00000415574 2762 ntBASIC13.76□□□□□ -0.21
SNX18Q96RF0 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 NUTM2HP-201ENST00000442076 2498 ntBASIC13.75□□□□□ -0.21
SNX18Q96RF0 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 MIR661-201ENST00000384842 89 ntBASIC13.75□□□□□ -0.21
SNX18Q96RF0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 AC008761.3-201ENST00000624803 892 ntBASIC13.75□□□□□ -0.21
SNX18Q96RF0 AC004461.2-201ENST00000629517 803 ntBASIC13.75□□□□□ -0.21
SNX18Q96RF0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.75□□□□□ -0.21
SNX18Q96RF0 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SNX18Q96RF0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SNX18Q96RF0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.74□□□□□ -0.21
SNX18Q96RF0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 FAM207CP-201ENST00000443486 507 ntBASIC13.74□□□□□ -0.21
SNX18Q96RF0 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.74□□□□□ -0.21
SNX18Q96RF0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.74□□□□□ -0.21
SNX18Q96RF0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms