Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 NPIPB2-202ENST00000399147 1194 ntAPPRIS P5 TSL 5 BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 TSPAN9-202ENST00000407263 956 ntTSL 5 BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 HNRNPA1P46-201ENST00000411735 937 ntBASIC9.02□□□□□ -0.97
SVIPQ8NHG7 AC111000.5-201ENST00000506559 1178 ntBASIC9.02□□□□□ -0.97
SVIPQ8NHG7 ANAPC15-213ENST00000543050 807 ntTSL 3 BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 UNC93A-202ENST00000366829 1810 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 TMBIM1-214ENST00000444881 2936 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 CD3G-206ENST00000532917 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 AL583844.1-201ENST00000424229 1724 ntBASIC9.02□□□□□ -0.97
SVIPQ8NHG7 ZNF423-205ENST00000562871 4514 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 MTCO1P46-201ENST00000451639 1491 ntBASIC9.02□□□□□ -0.97
SVIPQ8NHG7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 SZT2-209ENST00000562955 13968 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 ALOXE3-203ENST00000448843 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 FAR1-201ENST00000354817 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 TUBA1C-202ENST00000541364 1695 ntTSL 2 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 RAP1GAP-201ENST00000290101 3584 ntTSL 5 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 GOLGA8CP-201ENST00000446144 5237 ntBASIC9.01□□□□□ -0.97
SVIPQ8NHG7 BTG2-201ENST00000290551 2712 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 NUP62-202ENST00000422090 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 ZFY-204ENST00000449237 3464 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 CYP4A22-201ENST00000294337 1725 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 ZNHIT6-201ENST00000370574 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 RBM3-203ENST00000376759 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 ATG16L1-205ENST00000392020 3213 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 AL355994.1-201ENST00000424379 260 ntBASIC9.01□□□□□ -0.97
SVIPQ8NHG7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 AL096677.1-201ENST00000442884 814 ntTSL 3 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 SRP14-AS1-201ENST00000504245 2317 ntTSL 2 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 ZNF619-209ENST00000521353 1869 ntAPPRIS P4 TSL 5 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 AC022182.3-201ENST00000529239 2167 ntBASIC9.01□□□□□ -0.97
SVIPQ8NHG7 ZFYVE1-203ENST00000553891 3244 ntTSL 5 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 GALNT15-206ENST00000617544 2775 ntTSL 5 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 ALDH1L1-203ENST00000393434 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 LIPH-202ENST00000424591 2065 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 KCNAB1-201ENST00000302490 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 C19orf47-208ENST00000582783 3628 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 AC073349.2-201ENST00000427545 1603 ntBASIC9.01□□□□□ -0.97
SVIPQ8NHG7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 INS-IGF2-205ENST00000641326 2861 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 RPH3A-213ENST00000548866 2429 ntTSL 2 BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 UBOX5-201ENST00000217173 4631 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
SVIPQ8NHG7 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC9□□□□□ -0.97
SVIPQ8NHG7 IKZF1-201ENST00000331340 6189 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SVIPQ8NHG7 FAM117A-209ENST00000513602 1522 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
SVIPQ8NHG7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC9□□□□□ -0.97
SVIPQ8NHG7 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC9□□□□□ -0.97
SVIPQ8NHG7 ACTR1A-201ENST00000369905 2829 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SVIPQ8NHG7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
SVIPQ8NHG7 LSM3-201ENST00000306024 3815 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SVIPQ8NHG7 CTAGE5-206ENST00000396158 3695 ntTSL 1 (best) BASIC9□□□□□ -0.97
SVIPQ8NHG7 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms