Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 AC112693.3-201ENST00000624819 1983 ntBASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 AC006504.5-208ENST00000588784 2401 ntBASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 AL121949.3-201ENST00000406684 385 ntBASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 AC007952.5-201ENST00000572818 1486 ntBASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 AC126365.1-201ENST00000578585 1514 ntBASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 RN7SKP155-201ENST00000516031 288 ntBASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 AC004801.1-201ENST00000549557 360 ntBASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 AC106820.2-201ENST00000563775 3264 ntBASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 BX322534.1-201ENST00000635574 241 ntBASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 AC215524.1-201ENST00000635696 241 ntBASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 AL357143.1-203ENST00000639750 881 ntBASIC19.21■□□□□ 0.67
COL22A1Q8NFW1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 KRT8P43-201ENST00000406052 1458 ntBASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 MIR4254-201ENST00000581063 76 ntBASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 NEK4P3-201ENST00000604859 544 ntBASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 AC073869.4-201ENST00000620841 800 ntBASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL22A1Q8NFW1 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL22A1Q8NFW1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms