Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 AC120045.2-201ENST00000567334 178 ntBASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 AC093726.1-201ENST00000608064 963 ntBASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 AL442647.2-201ENST00000429864 857 ntBASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 PRSS30P-206ENST00000641773 873 ntBASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
ZNF439Q8NDP4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms