Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.76□□□□□ -0.21
HDDC2Q7Z4H3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
HDDC2Q7Z4H3 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDDC2Q7Z4H3 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDDC2Q7Z4H3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDDC2Q7Z4H3 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HDDC2Q7Z4H3 AC013726.1-201ENST00000563747 2285 ntBASIC13.76□□□□□ -0.21
HDDC2Q7Z4H3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.76□□□□□ -0.21
HDDC2Q7Z4H3 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.76□□□□□ -0.21
HDDC2Q7Z4H3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HDDC2Q7Z4H3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDDC2Q7Z4H3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
HDDC2Q7Z4H3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HDDC2Q7Z4H3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.76□□□□□ -0.21
HDDC2Q7Z4H3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HDDC2Q7Z4H3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.76□□□□□ -0.21
HDDC2Q7Z4H3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HDDC2Q7Z4H3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 AGAP7P-201ENST00000582299 2062 ntBASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 AGAP14-201ENST00000624701 2060 ntBASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 PMS2P2-201ENST00000425039 1128 ntBASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 RFPL4AP1-201ENST00000530883 850 ntBASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 RARRES2P5-201ENST00000564013 466 ntBASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 CICP11-201ENST00000434745 2827 ntBASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HDDC2Q7Z4H3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HDDC2Q7Z4H3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms