Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.62□□□□□ -0.23
SHFQ7M4L6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SHFQ7M4L6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SHFQ7M4L6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.62□□□□□ -0.23
SHFQ7M4L6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.62□□□□□ -0.23
SHFQ7M4L6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.62□□□□□ -0.23
SHFQ7M4L6 AP000347.1-202ENST00000435868 847 ntBASIC13.62□□□□□ -0.23
SHFQ7M4L6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.62□□□□□ -0.23
SHFQ7M4L6 AC022447.6-201ENST00000515522 438 ntBASIC13.62□□□□□ -0.23
SHFQ7M4L6 AC092865.5-201ENST00000545435 363 ntBASIC13.62□□□□□ -0.23
SHFQ7M4L6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.62□□□□□ -0.23
SHFQ7M4L6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.62□□□□□ -0.23
SHFQ7M4L6 AC073592.8-201ENST00000624126 511 ntBASIC13.62□□□□□ -0.23
SHFQ7M4L6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.62□□□□□ -0.23
SHFQ7M4L6 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.62□□□□□ -0.23
SHFQ7M4L6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SHFQ7M4L6 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SHFQ7M4L6 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SHFQ7M4L6 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SHFQ7M4L6 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.62□□□□□ -0.23
SHFQ7M4L6 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.62□□□□□ -0.23
SHFQ7M4L6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHFQ7M4L6 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 AL512361.1-201ENST00000554200 418 ntBASIC13.61□□□□□ -0.23
SHFQ7M4L6 SAMD11P1-201ENST00000571429 661 ntBASIC13.61□□□□□ -0.23
SHFQ7M4L6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 AL138828.2-201ENST00000615812 383 ntBASIC13.61□□□□□ -0.23
SHFQ7M4L6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 SPDYE12P-201ENST00000618416 771 ntBASIC13.61□□□□□ -0.23
SHFQ7M4L6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
SHFQ7M4L6 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 AL354702.1-201ENST00000442006 1960 ntBASIC13.61□□□□□ -0.23
SHFQ7M4L6 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHFQ7M4L6 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms