Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 AL359183.1-201ENST00000623796 2132 ntBASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H3AQ71DI3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 AC113367.3-201ENST00000508316 1912 ntBASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 AC007191.1-201ENST00000623179 2995 ntBASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 AC026434.2-201ENST00000506094 1078 ntBASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 AC190387.1-201ENST00000551683 408 ntBASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST2H3AQ71DI3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.21□□□□□ -0.3
HIST2H3AQ71DI3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST2H3AQ71DI3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST2H3AQ71DI3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
HIST2H3AQ71DI3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.21□□□□□ -0.3
HIST2H3AQ71DI3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.21□□□□□ -0.3
HIST2H3AQ71DI3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
HIST2H3AQ71DI3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.21□□□□□ -0.3
HIST2H3AQ71DI3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.21□□□□□ -0.3
HIST2H3AQ71DI3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST2H3AQ71DI3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 AC022137.2-201ENST00000503482 481 ntBASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.2□□□□□ -0.3
HIST2H3AQ71DI3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms