Protein–RNA interactions for Protein: Q6P3X8

PGBD2, PiggyBac transposable element-derived protein 2, humanhuman

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2Q6P3X8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 AC027612.4-201ENST00000605371 583 ntBASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 AL158212.4-201ENST00000624062 1286 ntBASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 MBLAC2-202ENST00000514906 1936 ntBASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 TUBB3P1-201ENST00000405796 1332 ntBASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 AC093525.8-201ENST00000624099 1342 ntBASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
PGBD2Q6P3X8 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 AC254562.1-201ENST00000417586 456 ntBASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 UPF3AP3-201ENST00000420996 769 ntBASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 CNN2P11-201ENST00000429351 262 ntBASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 TIMM17BP1-201ENST00000545713 516 ntBASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 AC092337.1-201ENST00000568699 1129 ntBASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 AC139530.3-201ENST00000620344 690 ntBASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.8□□□□□ -0.2
PGBD2Q6P3X8 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms