Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.77□□□□□ -0.21
PUDPQ08623 AC013726.1-201ENST00000563747 2285 ntBASIC13.77□□□□□ -0.21
PUDPQ08623 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.77□□□□□ -0.21
PUDPQ08623 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
PUDPQ08623 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PUDPQ08623 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.77□□□□□ -0.21
PUDPQ08623 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.76□□□□□ -0.21
PUDPQ08623 AJ011931.1-201ENST00000618749 2492 ntBASIC13.76□□□□□ -0.21
PUDPQ08623 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
PUDPQ08623 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.76□□□□□ -0.21
PUDPQ08623 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.76□□□□□ -0.21
PUDPQ08623 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.76□□□□□ -0.21
PUDPQ08623 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
PUDPQ08623 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PUDPQ08623 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.76□□□□□ -0.21
PUDPQ08623 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 UGT1A2P-201ENST00000454886 866 ntBASIC13.76□□□□□ -0.21
PUDPQ08623 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PUDPQ08623 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.76□□□□□ -0.21
PUDPQ08623 AC104596.2-201ENST00000512793 793 ntBASIC13.76□□□□□ -0.21
PUDPQ08623 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.76□□□□□ -0.21
PUDPQ08623 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.76□□□□□ -0.21
PUDPQ08623 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.76□□□□□ -0.21
PUDPQ08623 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.76□□□□□ -0.21
PUDPQ08623 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PUDPQ08623 AC099568.2-201ENST00000609194 695 ntBASIC13.76□□□□□ -0.21
PUDPQ08623 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.76□□□□□ -0.21
PUDPQ08623 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.76□□□□□ -0.21
PUDPQ08623 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.76□□□□□ -0.21
PUDPQ08623 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PUDPQ08623 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.76□□□□□ -0.21
PUDPQ08623 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PUDPQ08623 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PUDPQ08623 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PUDPQ08623 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PUDPQ08623 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PUDPQ08623 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PUDPQ08623 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PUDPQ08623 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
PUDPQ08623 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.75□□□□□ -0.21
PUDPQ08623 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PUDPQ08623 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
PUDPQ08623 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PUDPQ08623 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
PUDPQ08623 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PUDPQ08623 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.75□□□□□ -0.21
PUDPQ08623 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.75□□□□□ -0.21
PUDPQ08623 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PUDPQ08623 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PUDPQ08623 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.75□□□□□ -0.21
PUDPQ08623 SLC7A15P-201ENST00000424028 1363 ntBASIC13.75□□□□□ -0.21
PUDPQ08623 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.75□□□□□ -0.21
PUDPQ08623 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.75□□□□□ -0.21
PUDPQ08623 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.75□□□□□ -0.21
PUDPQ08623 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PUDPQ08623 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PUDPQ08623 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PUDPQ08623 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms