Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.7□□□□□ -0.38
SSBP1Q04837 AP001005.1-201ENST00000571755 1248 ntBASIC12.7□□□□□ -0.38
SSBP1Q04837 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.7□□□□□ -0.38
SSBP1Q04837 AC025048.3-201ENST00000590609 569 ntBASIC12.7□□□□□ -0.38
SSBP1Q04837 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SSBP1Q04837 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 RN7SL828P-201ENST00000607615 303 ntBASIC12.7□□□□□ -0.38
SSBP1Q04837 AC005702.4-201ENST00000618393 416 ntBASIC12.7□□□□□ -0.38
SSBP1Q04837 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.7□□□□□ -0.38
SSBP1Q04837 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
SSBP1Q04837 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.7□□□□□ -0.38
SSBP1Q04837 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.7□□□□□ -0.38
SSBP1Q04837 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
SSBP1Q04837 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.7□□□□□ -0.38
SSBP1Q04837 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SSBP1Q04837 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SSBP1Q04837 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.69□□□□□ -0.38
SSBP1Q04837 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SSBP1Q04837 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SSBP1Q04837 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.69□□□□□ -0.38
SSBP1Q04837 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.69□□□□□ -0.38
SSBP1Q04837 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.69□□□□□ -0.38
SSBP1Q04837 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SSBP1Q04837 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.69□□□□□ -0.38
SSBP1Q04837 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.69□□□□□ -0.38
SSBP1Q04837 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.69□□□□□ -0.38
SSBP1Q04837 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.69□□□□□ -0.38
SSBP1Q04837 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.69□□□□□ -0.38
SSBP1Q04837 RNA5SP419-201ENST00000515908 135 ntBASIC12.69□□□□□ -0.38
SSBP1Q04837 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.69□□□□□ -0.38
SSBP1Q04837 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SSBP1Q04837 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.69□□□□□ -0.38
SSBP1Q04837 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
SSBP1Q04837 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.69□□□□□ -0.38
SSBP1Q04837 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SSBP1Q04837 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SSBP1Q04837 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
SSBP1Q04837 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.69□□□□□ -0.38
SSBP1Q04837 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.69□□□□□ -0.38
SSBP1Q04837 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.69□□□□□ -0.38
SSBP1Q04837 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SSBP1Q04837 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP1Q04837 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.69□□□□□ -0.38
SSBP1Q04837 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SSBP1Q04837 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP1Q04837 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SSBP1Q04837 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP1Q04837 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP1Q04837 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP1Q04837 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
SSBP1Q04837 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP1Q04837 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SSBP1Q04837 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP1Q04837 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP1Q04837 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SSBP1Q04837 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
SSBP1Q04837 HLA-K-203ENST00000430151 1046 ntBASIC12.68□□□□□ -0.38
SSBP1Q04837 ACTG1P14-201ENST00000446382 1122 ntBASIC12.68□□□□□ -0.38
SSBP1Q04837 AC079781.3-201ENST00000449110 356 ntBASIC12.68□□□□□ -0.38
SSBP1Q04837 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.68□□□□□ -0.38
SSBP1Q04837 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
SSBP1Q04837 AC007967.4-201ENST00000614700 386 ntBASIC12.68□□□□□ -0.38
SSBP1Q04837 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.68□□□□□ -0.38
SSBP1Q04837 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP1Q04837 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms