Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS1BP61024 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC10.63□□□□□ -0.71
CKS1BP61024 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS1BP61024 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS1BP61024 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC10.63□□□□□ -0.71
CKS1BP61024 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
CKS1BP61024 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS1BP61024 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS1BP61024 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS1BP61024 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
CKS1BP61024 MST1P2-201ENST00000457982 2291 ntBASIC10.63□□□□□ -0.71
CKS1BP61024 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC10.63□□□□□ -0.71
CKS1BP61024 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
CKS1BP61024 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC10.63□□□□□ -0.71
CKS1BP61024 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CKS1BP61024 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
CKS1BP61024 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
CKS1BP61024 LSS-211ENST00000522411 2523 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC10.62□□□□□ -0.71
CKS1BP61024 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC10.62□□□□□ -0.71
CKS1BP61024 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC10.62□□□□□ -0.71
CKS1BP61024 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
CKS1BP61024 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC10.62□□□□□ -0.71
CKS1BP61024 DDT-204ENST00000404092 805 ntTSL 3 BASIC10.62□□□□□ -0.71
CKS1BP61024 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC10.62□□□□□ -0.71
CKS1BP61024 HNRNPDP1-201ENST00000439535 754 ntBASIC10.62□□□□□ -0.71
CKS1BP61024 AC018712.1-201ENST00000455767 687 ntBASIC10.62□□□□□ -0.71
CKS1BP61024 UNC93B6-202ENST00000528242 690 ntBASIC10.62□□□□□ -0.71
CKS1BP61024 POLD4-207ENST00000531239 584 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC10.62□□□□□ -0.71
CKS1BP61024 AC096734.2-201ENST00000562054 433 ntBASIC10.62□□□□□ -0.71
CKS1BP61024 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC10.62□□□□□ -0.71
CKS1BP61024 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 AC114271.1-201ENST00000612689 2813 ntBASIC10.62□□□□□ -0.71
CKS1BP61024 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC10.62□□□□□ -0.71
CKS1BP61024 PARN-202ENST00000420015 2360 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
CKS1BP61024 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC10.62□□□□□ -0.71
CKS1BP61024 ZBTB45P2-201ENST00000452245 1531 ntBASIC10.62□□□□□ -0.71
CKS1BP61024 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
CKS1BP61024 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
CKS1BP61024 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC10.62□□□□□ -0.71
CKS1BP61024 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
CKS1BP61024 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
CKS1BP61024 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CKS1BP61024 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC10.61□□□□□ -0.71
CKS1BP61024 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
CKS1BP61024 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
CKS1BP61024 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
CKS1BP61024 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
CKS1BP61024 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC10.61□□□□□ -0.71
CKS1BP61024 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CKS1BP61024 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms