Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.4□□□□□ -0.1
VSX2P58304 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.4□□□□□ -0.1
VSX2P58304 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSX2P58304 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.39□□□□□ -0.11
VSX2P58304 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VSX2P58304 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
VSX2P58304 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.39□□□□□ -0.11
VSX2P58304 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.39□□□□□ -0.11
VSX2P58304 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
VSX2P58304 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.39□□□□□ -0.11
VSX2P58304 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSX2P58304 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.39□□□□□ -0.11
VSX2P58304 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSX2P58304 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSX2P58304 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VSX2P58304 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
VSX2P58304 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.39□□□□□ -0.11
VSX2P58304 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.39□□□□□ -0.11
VSX2P58304 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSX2P58304 CD8B2-202ENST00000417670 633 ntBASIC14.39□□□□□ -0.11
VSX2P58304 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.39□□□□□ -0.11
VSX2P58304 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.39□□□□□ -0.11
VSX2P58304 FAM8A4P-201ENST00000435433 1213 ntBASIC14.39□□□□□ -0.11
VSX2P58304 AC007274.1-201ENST00000439805 662 ntBASIC14.39□□□□□ -0.11
VSX2P58304 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.39□□□□□ -0.11
VSX2P58304 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
VSX2P58304 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.39□□□□□ -0.11
VSX2P58304 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.39□□□□□ -0.11
VSX2P58304 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSX2P58304 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSX2P58304 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
VSX2P58304 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.39□□□□□ -0.11
VSX2P58304 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSX2P58304 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VSX2P58304 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.39□□□□□ -0.11
VSX2P58304 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSX2P58304 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VSX2P58304 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSX2P58304 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VSX2P58304 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSX2P58304 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSX2P58304 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
VSX2P58304 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.39□□□□□ -0.11
VSX2P58304 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
VSX2P58304 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
VSX2P58304 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VSX2P58304 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
VSX2P58304 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
VSX2P58304 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
VSX2P58304 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.38□□□□□ -0.11
VSX2P58304 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.38□□□□□ -0.11
VSX2P58304 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
VSX2P58304 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.38□□□□□ -0.11
VSX2P58304 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VSX2P58304 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.38□□□□□ -0.11
VSX2P58304 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.38□□□□□ -0.11
VSX2P58304 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.38□□□□□ -0.11
VSX2P58304 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.38□□□□□ -0.11
VSX2P58304 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.38□□□□□ -0.11
VSX2P58304 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VSX2P58304 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.38□□□□□ -0.11
VSX2P58304 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.38□□□□□ -0.11
VSX2P58304 OR10B1P-201ENST00000601666 907 ntBASIC14.38□□□□□ -0.11
VSX2P58304 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
VSX2P58304 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.38□□□□□ -0.11
VSX2P58304 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
VSX2P58304 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.38□□□□□ -0.11
VSX2P58304 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
VSX2P58304 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
VSX2P58304 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.38□□□□□ -0.11
VSX2P58304 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VSX2P58304 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms