Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.44■□□□□ 0.22
CPT1AP50416 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPT1AP50416 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.44■□□□□ 0.22
CPT1AP50416 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.44■□□□□ 0.22
CPT1AP50416 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.44■□□□□ 0.22
CPT1AP50416 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.44■□□□□ 0.22
CPT1AP50416 AC011491.1-203ENST00000637688 543 ntBASIC16.44■□□□□ 0.22
CPT1AP50416 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.44■□□□□ 0.22
CPT1AP50416 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPT1AP50416 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CPT1AP50416 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.44■□□□□ 0.22
CPT1AP50416 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPT1AP50416 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPT1AP50416 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPT1AP50416 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPT1AP50416 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPT1AP50416 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPT1AP50416 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPT1AP50416 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CPT1AP50416 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.43■□□□□ 0.22
CPT1AP50416 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPT1AP50416 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPT1AP50416 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.43■□□□□ 0.22
CPT1AP50416 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CPT1AP50416 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPT1AP50416 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.43■□□□□ 0.22
CPT1AP50416 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.43■□□□□ 0.22
CPT1AP50416 AL592076.1-201ENST00000424448 303 ntBASIC16.43■□□□□ 0.22
CPT1AP50416 RPL8P2-201ENST00000430538 502 ntBASIC16.43■□□□□ 0.22
CPT1AP50416 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.43■□□□□ 0.22
CPT1AP50416 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.43■□□□□ 0.22
CPT1AP50416 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPT1AP50416 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.43■□□□□ 0.22
CPT1AP50416 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CPT1AP50416 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CPT1AP50416 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.43■□□□□ 0.22
CPT1AP50416 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.43■□□□□ 0.22
CPT1AP50416 AP003419.4-201ENST00000616071 517 ntBASIC16.43■□□□□ 0.22
CPT1AP50416 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.43■□□□□ 0.22
CPT1AP50416 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPT1AP50416 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CPT1AP50416 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPT1AP50416 AC136621.1-201ENST00000624017 2304 ntBASIC16.43■□□□□ 0.22
CPT1AP50416 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPT1AP50416 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPT1AP50416 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPT1AP50416 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPT1AP50416 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPT1AP50416 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPT1AP50416 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPT1AP50416 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPT1AP50416 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CPT1AP50416 AHCYP4-201ENST00000419201 1315 ntBASIC16.43■□□□□ 0.22
CPT1AP50416 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPT1AP50416 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
CPT1AP50416 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPT1AP50416 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.42■□□□□ 0.22
CPT1AP50416 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPT1AP50416 AC018629.1-201ENST00000623381 1736 ntBASIC16.42■□□□□ 0.22
CPT1AP50416 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPT1AP50416 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPT1AP50416 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CPT1AP50416 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.42■□□□□ 0.22
CPT1AP50416 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.42■□□□□ 0.22
CPT1AP50416 CAP2P1-201ENST00000557743 1390 ntBASIC16.42■□□□□ 0.22
CPT1AP50416 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPT1AP50416 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPT1AP50416 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPT1AP50416 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.42■□□□□ 0.22
CPT1AP50416 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPT1AP50416 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CPT1AP50416 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.42■□□□□ 0.22
CPT1AP50416 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPT1AP50416 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.42■□□□□ 0.22
CPT1AP50416 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.42■□□□□ 0.22
CPT1AP50416 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.42■□□□□ 0.22
CPT1AP50416 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPT1AP50416 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPT1AP50416 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CPT1AP50416 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.42■□□□□ 0.22
CPT1AP50416 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.42■□□□□ 0.22
CPT1AP50416 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPT1AP50416 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.42■□□□□ 0.22
CPT1AP50416 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.42■□□□□ 0.22
CPT1AP50416 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.42■□□□□ 0.22
CPT1AP50416 MEG3_2.1-201ENST00000611456 105 ntBASIC16.42■□□□□ 0.22
CPT1AP50416 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CPT1AP50416 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.42■□□□□ 0.22
CPT1AP50416 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPT1AP50416 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPT1AP50416 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPT1AP50416 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPT1AP50416 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.42■□□□□ 0.22
CPT1AP50416 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.42■□□□□ 0.22
CPT1AP50416 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.42■□□□□ 0.22
CPT1AP50416 MRPL37P1-201ENST00000592451 1337 ntBASIC16.42■□□□□ 0.22
CPT1AP50416 AC074138.1-201ENST00000611182 1303 ntBASIC16.42■□□□□ 0.22
CPT1AP50416 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.42■□□□□ 0.22
CPT1AP50416 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CPT1AP50416 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms