Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SAMHD1-201ENST00000262878 4784 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 AL008628.1-201ENST00000564198 5187 ntBASIC9.82□□□□□ -0.84
PCP4P48539 SPATA13-202ENST00000382095 6665 ntAPPRIS P3 TSL 2 BASIC9.82□□□□□ -0.84
PCP4P48539 GTF3C1-201ENST00000356183 7018 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 E2F8-205ENST00000620009 3519 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
PCP4P48539 SPIB-202ENST00000439922 3311 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
PCP4P48539 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 ATAT1-203ENST00000329992 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
PCP4P48539 AC243964.3-201ENST00000623022 2028 ntBASIC9.82□□□□□ -0.84
PCP4P48539 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC9.82□□□□□ -0.84
PCP4P48539 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
PCP4P48539 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
PCP4P48539 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC9.82□□□□□ -0.84
PCP4P48539 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 RAP1GAP2-202ENST00000366401 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 SLC22A11-201ENST00000301891 3860 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PCP4P48539 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 ZKSCAN3-201ENST00000252211 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 WBP11-201ENST00000261167 4646 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 DGKI-213ENST00000614521 2799 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
PCP4P48539 MMP2-202ENST00000437642 2469 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 PARP8-220ENST00000514342 2384 ntTSL 5 BASIC9.81□□□□□ -0.84
PCP4P48539 SWT1-201ENST00000367500 3830 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 ZNF648-201ENST00000339948 3649 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 MYOZ3-201ENST00000297130 3445 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC9.81□□□□□ -0.84
PCP4P48539 RAPGEF6-209ENST00000510071 3107 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 SLC8A3-201ENST00000216568 2916 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 ZIC4-202ENST00000425731 3979 ntTSL 2 BASIC9.81□□□□□ -0.84
PCP4P48539 JAK3-204ENST00000527670 3996 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
PCP4P48539 WWP2-213ENST00000568684 3672 ntTSL 2 BASIC9.81□□□□□ -0.84
PCP4P48539 SHROOM2-202ENST00000418909 4615 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 PPP1R2-206ENST00000618156 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
PCP4P48539 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
PCP4P48539 PAPD4-207ENST00000504233 2997 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC9.81□□□□□ -0.84
PCP4P48539 MUC13-205ENST00000616727 2879 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 FAM13A-213ENST00000509094 2762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 P4HA2-205ENST00000379104 2569 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 WDR83OS-202ENST00000596731 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 AC090505.1-201ENST00000430515 1834 ntBASIC9.81□□□□□ -0.84
PCP4P48539 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 F2-205ENST00000530231 1849 ntTSL 5 BASIC9.81□□□□□ -0.84
PCP4P48539 DNAI2-205ENST00000579490 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC9.81□□□□□ -0.84
PCP4P48539 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
PCP4P48539 AC016026.1-201ENST00000476405 4328 ntTSL 2 BASIC9.81□□□□□ -0.84
PCP4P48539 BEND3P2-201ENST00000414425 2254 ntBASIC9.81□□□□□ -0.84
PCP4P48539 AL590483.3-201ENST00000623669 3580 ntBASIC9.81□□□□□ -0.84
PCP4P48539 TRPV2-201ENST00000338560 2808 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC9.81□□□□□ -0.84
PCP4P48539 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC9.81□□□□□ -0.84
PCP4P48539 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC9.81□□□□□ -0.84
PCP4P48539 SLC6A12-202ENST00000397296 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 C16orf96-201ENST00000444310 3823 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
PCP4P48539 ZNF169-202ENST00000395395 1986 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
PCP4P48539 AC020917.4-201ENST00000623994 1999 ntBASIC9.81□□□□□ -0.84
PCP4P48539 STPG1-201ENST00000003583 2544 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
PCP4P48539 SRGAP2-AS1-202ENST00000437515 2504 ntTSL 2 BASIC9.81□□□□□ -0.84
PCP4P48539 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 CTAGE13P-201ENST00000416709 2446 ntBASIC9.81□□□□□ -0.84
PCP4P48539 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 TUBB8P12-201ENST00000308911 1335 ntBASIC9.81□□□□□ -0.84
PCP4P48539 TUBB7P-202ENST00000428444 1305 ntBASIC9.81□□□□□ -0.84
PCP4P48539 PPFIA2-227ENST00000552948 3976 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PCP4P48539 TUBB8P7-204ENST00000567960 1332 ntBASIC9.81□□□□□ -0.84
PCP4P48539 HYI-213ENST00000583037 1322 ntTSL 5 BASIC9.81□□□□□ -0.84
PCP4P48539 AL353611.2-201ENST00000625008 2897 ntBASIC9.81□□□□□ -0.84
PCP4P48539 TACC2-206ENST00000368999 3879 ntTSL 5 BASIC9.81□□□□□ -0.84
PCP4P48539 MMP2-208ENST00000570308 3235 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 BCAS3-222ENST00000589222 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 LRRC41-207ENST00000617190 4128 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PCP4P48539 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC9.8□□□□□ -0.84
PCP4P48539 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms