RNA–Protein interactions for RNA: ENST00000439922.6

SPIB-202, Transcript of Spi-B transcription factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIB, Length 3,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIB-202ENST00000439922 NISCHQ9Y2I1 1504 aa23.01■■□□□ 1.27
SPIB-202ENST00000439922 SHROOM4Q9ULL8 1493 aa20.02■□□□□ 0.8
SPIB-202ENST00000439922 DCAF8L2P0C7V8 631 aa19.99■□□□□ 0.79
SPIB-202ENST00000439922 SUPT5HO00267 1087 aaKnown RBP19.54■□□□□ 0.72
SPIB-202ENST00000439922 CCDC180Q9P1Z9 1646 aa19.46■□□□□ 0.71
SPIB-202ENST00000439922 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
SPIB-202ENST00000439922 ABCC9O60706 1549 aa18.86■□□□□ 0.61
SPIB-202ENST00000439922 SCRIBQ14160 1630 aa18.61■□□□□ 0.57
SPIB-202ENST00000439922 DCAF1Q9Y4B6 1507 aa18.61■□□□□ 0.57
SPIB-202ENST00000439922 CHIC1Q5VXU3 224 aa18.54■□□□□ 0.56
SPIB-202ENST00000439922 MYO15BQ96JP2 1530 aa18.3■□□□□ 0.52
SPIB-202ENST00000439922 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
SPIB-202ENST00000439922 HRCP23327 699 aa18.23■□□□□ 0.51
SPIB-202ENST00000439922 LOC105371045A0A1W2PR82 267 aa18.2■□□□□ 0.5
SPIB-202ENST00000439922 RSF1Q96T23 1441 aaPredicted RBP18.19■□□□□ 0.5
SPIB-202ENST00000439922 NACADO15069 1562 aa18.19■□□□□ 0.5
SPIB-202ENST00000439922 FAM9AQ8IZU1 332 aaPredicted RBP18.17■□□□□ 0.5
SPIB-202ENST00000439922 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
SPIB-202ENST00000439922 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.5
SPIB-202ENST00000439922 PPARGC1BQ86YN6 1023 aaKnown RBP18.11■□□□□ 0.49
SPIB-202ENST00000439922 TRIM41Q8WV44 630 aa18.07■□□□□ 0.48
SPIB-202ENST00000439922 RB1CC1Q8TDY2 1594 aa18.05■□□□□ 0.48
SPIB-202ENST00000439922 PCGF6Q9BYE7 350 aa18.05■□□□□ 0.48
SPIB-202ENST00000439922 MROH2BQ7Z745 1585 aa17.98■□□□□ 0.47
SPIB-202ENST00000439922 PELP1Q8IZL8 1130 aaKnown RBP17.9■□□□□ 0.46
SPIB-202ENST00000439922 WIZO95785 1651 aa17.87■□□□□ 0.45
SPIB-202ENST00000439922 BAZ1AQ9NRL2 1556 aaPredicted RBP17.7■□□□□ 0.42
SPIB-202ENST00000439922 UNC13AQ9UPW8 1703 aa17.67■□□□□ 0.42
SPIB-202ENST00000439922 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
SPIB-202ENST00000439922 TTBK1Q5TCY1 1321 aaPredicted RBP17.53■□□□□ 0.4
SPIB-202ENST00000439922 CCDC88BA6NC98 1476 aa17.52■□□□□ 0.39
SPIB-202ENST00000439922 BICRAQ9NZM4 1560 aa17.5■□□□□ 0.39
SPIB-202ENST00000439922 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
SPIB-202ENST00000439922 TOP2AP11388 1531 aaKnown RBP17.45■□□□□ 0.38
SPIB-202ENST00000439922 SCAF1Q9H7N4 1312 aaKnown RBP17.45■□□□□ 0.38
SPIB-202ENST00000439922 TRIM26Q12899 539 aaPredicted RBP17.41■□□□□ 0.38
SPIB-202ENST00000439922 RANGAP1P46060 587 aaPredicted RBP17.38■□□□□ 0.37
SPIB-202ENST00000439922 SMARCA2P51531 1590 aa17.38■□□□□ 0.37
SPIB-202ENST00000439922 UBTFP17480 764 aaKnown RBP17.36■□□□□ 0.37
SPIB-202ENST00000439922 BAZ1BQ9UIG0 1483 aaKnown RBP17.3■□□□□ 0.36
SPIB-202ENST00000439922 SOGA1O94964 1423 aa17.29■□□□□ 0.36
SPIB-202ENST00000439922 ATAD2BQ9ULI0 1458 aa17.27■□□□□ 0.36
SPIB-202ENST00000439922 MYT1Q01538 1121 aa17.23■□□□□ 0.35
SPIB-202ENST00000439922 RUSC2Q8N2Y8 1516 aa17.21■□□□□ 0.35
SPIB-202ENST00000439922 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
SPIB-202ENST00000439922 EIF4G1Q04637 1599 aaKnown RBP17.19■□□□□ 0.34
SPIB-202ENST00000439922 WRNQ14191 1432 aaPredicted RBP eCLIP17.18■□□□□ 0.34
SPIB-202ENST00000439922 PEG3Q9GZU2 1588 aa17.04■□□□□ 0.32
SPIB-202ENST00000439922 ZEB1P37275 1124 aaPredicted RBP17.04■□□□□ 0.32
SPIB-202ENST00000439922 CEP162Q5TB80 1403 aa17.03■□□□□ 0.32
SPIB-202ENST00000439922 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.02■□□□□ 0.31
SPIB-202ENST00000439922 SYNJ1O43426 1573 aa17■□□□□ 0.31
SPIB-202ENST00000439922 GTF3C3Q9Y5Q9 886 aa16.97■□□□□ 0.31
SPIB-202ENST00000439922 NEUROD1Q13562 356 aa16.95■□□□□ 0.3
SPIB-202ENST00000439922 CCER1Q8TC90 406 aaPredicted RBP16.94■□□□□ 0.3
SPIB-202ENST00000439922 ACIN1Q9UKV3 1341 aaKnown RBP16.94■□□□□ 0.3
SPIB-202ENST00000439922 TNIKQ9UKE5 1360 aa16.92■□□□□ 0.3
SPIB-202ENST00000439922 APLP2Q06481 763 aa16.9■□□□□ 0.3
SPIB-202ENST00000439922 GOLGA3Q08378 1498 aa16.9■□□□□ 0.3
SPIB-202ENST00000439922 EEA1Q15075 1411 aa16.9■□□□□ 0.3
SPIB-202ENST00000439922 NCAPD3P42695 1498 aa16.89■□□□□ 0.3
SPIB-202ENST00000439922 HNRNPUL2Q1KMD3 747 aaKnown RBP16.85■□□□□ 0.29
SPIB-202ENST00000439922 CENPBP07199 599 aaPredicted RBP16.83■□□□□ 0.29
SPIB-202ENST00000439922 RAPGEF2Q9Y4G8 1499 aa16.83■□□□□ 0.28
SPIB-202ENST00000439922 CEP164Q9UPV0 1460 aa16.82■□□□□ 0.28
SPIB-202ENST00000439922 CLIP1P30622 1438 aa16.81■□□□□ 0.28
SPIB-202ENST00000439922 HMGXB3Q12766 1538 aa16.78■□□□□ 0.28
SPIB-202ENST00000439922 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
SPIB-202ENST00000439922 CC2D2AQ9P2K1 1620 aa16.74■□□□□ 0.27
SPIB-202ENST00000439922 ATP1B4Q9UN42 357 aaPredicted RBP16.73■□□□□ 0.27
SPIB-202ENST00000439922 CUX1P39880 1505 aa16.72■□□□□ 0.27
SPIB-202ENST00000439922 TOP2BQ02880 1626 aa16.71■□□□□ 0.27
SPIB-202ENST00000439922 CFTRP13569 1480 aa16.71■□□□□ 0.27
SPIB-202ENST00000439922 YTHDC1Q96MU7 727 aaKnown RBP16.71■□□□□ 0.27
SPIB-202ENST00000439922 CADPSQ9ULU8 1353 aa16.7■□□□□ 0.26
SPIB-202ENST00000439922 P3H3Q8IVL6 736 aa16.69■□□□□ 0.26
SPIB-202ENST00000439922 KIF27Q86VH2 1401 aa16.67■□□□□ 0.26
SPIB-202ENST00000439922 CUX2O14529 1486 aa16.65■□□□□ 0.26
SPIB-202ENST00000439922 NESP48681 1621 aa16.64■□□□□ 0.25
SPIB-202ENST00000439922 ITGAEP38570 1179 aa16.64■□□□□ 0.25
SPIB-202ENST00000439922 DIEXFQ68CQ4 756 aaKnown RBP16.63■□□□□ 0.25
SPIB-202ENST00000439922 KIF21BO75037 1637 aa16.62■□□□□ 0.25
SPIB-202ENST00000439922 VPS8Q8N3P4 1428 aa16.59■□□□□ 0.25
SPIB-202ENST00000439922 BIVM-ERCC5R4GMW8 1640 aa16.57■□□□□ 0.24
SPIB-202ENST00000439922 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
SPIB-202ENST00000439922 KANK4Q5T7N3 995 aaPredicted RBP16.56■□□□□ 0.24
SPIB-202ENST00000439922 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
SPIB-202ENST00000439922 PRXQ9BXM0 1461 aa16.52■□□□□ 0.24
SPIB-202ENST00000439922 RAD54L2Q9Y4B4 1467 aa16.52■□□□□ 0.24
SPIB-202ENST00000439922 CARMIL1Q5VZK9 1371 aa16.51■□□□□ 0.23
SPIB-202ENST00000439922 IGF1RP08069 1367 aa16.5■□□□□ 0.23
SPIB-202ENST00000439922 ARAP1Q96P48 1450 aa16.45■□□□□ 0.22
SPIB-202ENST00000439922 TDRD9Q8NDG6 1382 aaKnown RBP16.45■□□□□ 0.22
SPIB-202ENST00000439922 ERICH3Q5RHP9 1530 aa16.4■□□□□ 0.22
SPIB-202ENST00000439922 FAM50AQ14320 339 aaKnown RBP16.37■□□□□ 0.21
SPIB-202ENST00000439922 ARHGAP35Q9NRY4 1499 aa16.37■□□□□ 0.21
SPIB-202ENST00000439922 ARID3CA6NKF2 412 aa16.37■□□□□ 0.21
SPIB-202ENST00000439922 TOPBP1Q92547 1522 aa16.36■□□□□ 0.21
SPIB-202ENST00000439922 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
SPIB-202ENST00000439922 PRDM2Q13029 1718 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms