RNA–Protein interactions for RNA: ENST00000425731.7

ZIC4-202, Transcript of Zic family member 4, humanhuman

TSL 2 BASIC

Gene ZIC4, Length 3,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-202ENST00000425731 NISCHQ9Y2I1 1504 aa18.73■□□□□ 0.59
ZIC4-202ENST00000425731 DCAF8L2P0C7V8 631 aa18.52■□□□□ 0.56
ZIC4-202ENST00000425731 SUPT5HO00267 1087 aaKnown RBP18.06■□□□□ 0.48
ZIC4-202ENST00000425731 PCGF6Q9BYE7 350 aa17.89■□□□□ 0.45
ZIC4-202ENST00000425731 SHROOM4Q9ULL8 1493 aa17.76■□□□□ 0.43
ZIC4-202ENST00000425731 HRCP23327 699 aa17.61■□□□□ 0.41
ZIC4-202ENST00000425731 PPARGC1BQ86YN6 1023 aaKnown RBP17.59■□□□□ 0.41
ZIC4-202ENST00000425731 PELP1Q8IZL8 1130 aaKnown RBP17.57■□□□□ 0.4
ZIC4-202ENST00000425731 EHMT2Q96KQ7 1210 aa17.35■□□□□ 0.37
ZIC4-202ENST00000425731 MYT1Q01538 1121 aa17.02■□□□□ 0.32
ZIC4-202ENST00000425731 FAM9AQ8IZU1 332 aaPredicted RBP16.96■□□□□ 0.3
ZIC4-202ENST00000425731 CENPBP07199 599 aaPredicted RBP16.94■□□□□ 0.3
ZIC4-202ENST00000425731 LOC105371045A0A1W2PR82 267 aa16.92■□□□□ 0.3
ZIC4-202ENST00000425731 ZEB1P37275 1124 aaPredicted RBP16.92■□□□□ 0.3
ZIC4-202ENST00000425731 TTBK1Q5TCY1 1321 aaPredicted RBP16.87■□□□□ 0.29
ZIC4-202ENST00000425731 YTHDC1Q96MU7 727 aaKnown RBP16.87■□□□□ 0.29
ZIC4-202ENST00000425731 CHIC1Q5VXU3 224 aa16.85■□□□□ 0.29
ZIC4-202ENST00000425731 TRIM26Q12899 539 aaPredicted RBP16.84■□□□□ 0.29
ZIC4-202ENST00000425731 CCER1Q8TC90 406 aaPredicted RBP16.78■□□□□ 0.28
ZIC4-202ENST00000425731 SCAF1Q9H7N4 1312 aaKnown RBP16.71■□□□□ 0.27
ZIC4-202ENST00000425731 GTF3C3Q9Y5Q9 886 aa16.67■□□□□ 0.26
ZIC4-202ENST00000425731 ACIN1Q9UKV3 1341 aaKnown RBP16.49■□□□□ 0.23
ZIC4-202ENST00000425731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.48■□□□□ 0.23
ZIC4-202ENST00000425731 TRIM41Q8WV44 630 aa16.46■□□□□ 0.23
ZIC4-202ENST00000425731 DIEXFQ68CQ4 756 aaKnown RBP16.45■□□□□ 0.22
ZIC4-202ENST00000425731 NEUROD1Q13562 356 aa16.42■□□□□ 0.22
ZIC4-202ENST00000425731 MYO15BQ96JP2 1530 aa16.26■□□□□ 0.19
ZIC4-202ENST00000425731 ERICH6Q7L0X2 663 aa16.22■□□□□ 0.19
ZIC4-202ENST00000425731 ABCC9O60706 1549 aa16.17■□□□□ 0.18
ZIC4-202ENST00000425731 RANGAP1P46060 587 aaPredicted RBP16.11■□□□□ 0.17
ZIC4-202ENST00000425731 APLP2Q06481 763 aa16.07■□□□□ 0.16
ZIC4-202ENST00000425731 PABPN1Q86U42 306 aaKnown RBP eCLIP16.06■□□□□ 0.16
ZIC4-202ENST00000425731 BCANQ96GW7 911 aa16.05■□□□□ 0.16
ZIC4-202ENST00000425731 HNRNPUL2Q1KMD3 747 aaKnown RBP16.01■□□□□ 0.15
ZIC4-202ENST00000425731 DCAF1Q9Y4B6 1507 aa16■□□□□ 0.15
ZIC4-202ENST00000425731 CCDC180Q9P1Z9 1646 aa15.99■□□□□ 0.15
ZIC4-202ENST00000425731 NEFLP07196 543 aa15.99■□□□□ 0.15
ZIC4-202ENST00000425731 UBTFP17480 764 aaKnown RBP15.96■□□□□ 0.15
ZIC4-202ENST00000425731 ZNF316A6NFI3 1004 aaPredicted RBP15.92■□□□□ 0.14
ZIC4-202ENST00000425731 ZCCHC6Q5VYS8 1495 aaKnown RBP15.81■□□□□ 0.12
ZIC4-202ENST00000425731 MIER1Q8N108 512 aa15.8■□□□□ 0.12
ZIC4-202ENST00000425731 BCL11AQ9H165 835 aa15.77■□□□□ 0.11
ZIC4-202ENST00000425731 ITGAEP38570 1179 aa15.68■□□□□ 0.1
ZIC4-202ENST00000425731 ANP32EQ9BTT0 268 aa15.68■□□□□ 0.1
ZIC4-202ENST00000425731 FKBP8Q14318 412 aa15.6■□□□□ 0.09
ZIC4-202ENST00000425731 ATP1B4Q9UN42 357 aaPredicted RBP15.59■□□□□ 0.09
ZIC4-202ENST00000425731 CSRNP3Q8WYN3 585 aa15.51■□□□□ 0.07
ZIC4-202ENST00000425731 CNGB1Q14028 1251 aaPredicted RBP15.48■□□□□ 0.07
ZIC4-202ENST00000425731 SUPT16HQ9Y5B9 1047 aaKnown RBP15.48■□□□□ 0.07
ZIC4-202ENST00000425731 RTL5Q5HYW3 569 aaPredicted RBP15.45■□□□□ 0.06
ZIC4-202ENST00000425731 CDK11AQ9UQ88 783 aaPredicted RBP15.43■□□□□ 0.06
ZIC4-202ENST00000425731 TRIM52Q96A61 297 aa15.38■□□□□ 0.05
ZIC4-202ENST00000425731 TSHZ2Q9NRE2 1034 aa15.37■□□□□ 0.05
ZIC4-202ENST00000425731 NBR1Q14596 966 aa15.37■□□□□ 0.05
ZIC4-202ENST00000425731 CLSPNQ9HAW4 1339 aa15.35■□□□□ 0.05
ZIC4-202ENST00000425731 IRX6P78412 446 aaPredicted RBP15.33■□□□□ 0.04
ZIC4-202ENST00000425731 DDX10Q13206 875 aaKnown RBP15.3■□□□□ 0.04
ZIC4-202ENST00000425731 EIF5BO60841 1220 aaKnown RBP15.29■□□□□ 0.04
ZIC4-202ENST00000425731 ANP32CO43423 234 aa15.26■□□□□ 0.03
ZIC4-202ENST00000425731 POLR3GLQ9BT43 218 aa15.24■□□□□ 0.03
ZIC4-202ENST00000425731 RBM19Q9Y4C8 960 aaKnown RBP15.23■□□□□ 0.03
ZIC4-202ENST00000425731 HIRIP3Q9BW71 556 aaPredicted RBP15.21■□□□□ 0.03
ZIC4-202ENST00000425731 SCRIBQ14160 1630 aa15.19■□□□□ 0.02
ZIC4-202ENST00000425731 RTN4Q9NQC3 1192 aaKnown RBP15.19■□□□□ 0.02
ZIC4-202ENST00000425731 DAXXQ9UER7 740 aaPredicted RBP15.17■□□□□ 0.02
ZIC4-202ENST00000425731 NPM2Q86SE8 214 aaKnown RBP15.15■□□□□ 0.02
ZIC4-202ENST00000425731 HNRNPUQ00839 825 aaKnown RBP eCLIP15.15■□□□□ 0.02
ZIC4-202ENST00000425731 FAM50AQ14320 339 aaKnown RBP15.1■□□□□ 0.01
ZIC4-202ENST00000425731 DEKP35659 375 aaKnown RBP15.09■□□□□ 0.01
ZIC4-202ENST00000425731 ANP32AP39687 249 aaKnown RBP15.08■□□□□ 0
ZIC4-202ENST00000425731 FBLN2P98095 1184 aa15.06■□□□□ 0
ZIC4-202ENST00000425731 RB1CC1Q8TDY2 1594 aa15.06■□□□□ 0
ZIC4-202ENST00000425731 KCNH8Q96L42 1107 aa15.05■□□□□ 0
ZIC4-202ENST00000425731 MYT1LQ9UL68 1186 aa15.02■□□□□ -0
ZIC4-202ENST00000425731 NACADO15069 1562 aa15□□□□□ -0.01
ZIC4-202ENST00000425731 FAM9BQ8IZU0 186 aa14.98□□□□□ -0.01
ZIC4-202ENST00000425731 ZBTB47Q9UFB7 747 aaPredicted RBP14.98□□□□□ -0.01
ZIC4-202ENST00000425731 CCDC136Q96JN2 1154 aa14.98□□□□□ -0.01
ZIC4-202ENST00000425731 ARID3CA6NKF2 412 aa14.97□□□□□ -0.01
ZIC4-202ENST00000425731 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.97□□□□□ -0.01
ZIC4-202ENST00000425731 SENP3-EIF4A1A0A087X0R7 540 aa14.96□□□□□ -0.01
ZIC4-202ENST00000425731 PRKCSHP14314 528 aaPredicted RBP14.96□□□□□ -0.01
ZIC4-202ENST00000425731 CEP162Q5TB80 1403 aa14.95□□□□□ -0.02
ZIC4-202ENST00000425731 P3H3Q8IVL6 736 aa14.91□□□□□ -0.02
ZIC4-202ENST00000425731 B4GALNT3Q6L9W6 998 aa14.9□□□□□ -0.02
ZIC4-202ENST00000425731 NOP58Q9Y2X3 529 aaKnown RBP14.86□□□□□ -0.03
ZIC4-202ENST00000425731 RSF1Q96T23 1441 aaPredicted RBP14.86□□□□□ -0.03
ZIC4-202ENST00000425731 ANO8Q9HCE9 1232 aaPredicted RBP14.85□□□□□ -0.03
ZIC4-202ENST00000425731 LAS1LQ9Y4W2 734 aaKnown RBP14.84□□□□□ -0.03
ZIC4-202ENST00000425731 ARXQ96QS3 562 aa14.82□□□□□ -0.04
ZIC4-202ENST00000425731 SALL2Q9Y467 1007 aaPredicted RBP14.81□□□□□ -0.04
ZIC4-202ENST00000425731 SIN3AQ96ST3 1273 aa14.81□□□□□ -0.04
ZIC4-202ENST00000425731 ZNF326Q5BKZ1 582 aaKnown RBP14.78□□□□□ -0.04
ZIC4-202ENST00000425731 MRS2Q9HD23 443 aa14.77□□□□□ -0.05
ZIC4-202ENST00000425731 NEFMP07197 916 aa14.75□□□□□ -0.05
ZIC4-202ENST00000425731 PPP4R2Q9NY27 417 aa14.75□□□□□ -0.05
ZIC4-202ENST00000425731 CECR2Q9BXF3 1484 aa14.74□□□□□ -0.05
ZIC4-202ENST00000425731 CLIP1P30622 1438 aa14.73□□□□□ -0.05
ZIC4-202ENST00000425731 TONSLQ96HA7 1378 aa14.73□□□□□ -0.05
ZIC4-202ENST00000425731 TNIKQ9UKE5 1360 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms