RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 NISCHQ9Y2I1 1504 aa21.62■■□□□ 1.05
PPFIA2-227ENST00000552948 SHROOM4Q9ULL8 1493 aa19.8■□□□□ 0.76
PPFIA2-227ENST00000552948 SUPT5HO00267 1087 aaKnown RBP19.78■□□□□ 0.76
PPFIA2-227ENST00000552948 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
PPFIA2-227ENST00000552948 PCGF6Q9BYE7 350 aa19.23■□□□□ 0.67
PPFIA2-227ENST00000552948 HRCP23327 699 aa19.13■□□□□ 0.65
PPFIA2-227ENST00000552948 PPARGC1BQ86YN6 1023 aaKnown RBP18.98■□□□□ 0.63
PPFIA2-227ENST00000552948 CHIC1Q5VXU3 224 aa18.9■□□□□ 0.62
PPFIA2-227ENST00000552948 LOC105371045A0A1W2PR82 267 aa18.69■□□□□ 0.58
PPFIA2-227ENST00000552948 MYO15BQ96JP2 1530 aa18.63■□□□□ 0.57
PPFIA2-227ENST00000552948 EHMT2Q96KQ7 1210 aa18.58■□□□□ 0.57
PPFIA2-227ENST00000552948 FAM9AQ8IZU1 332 aaPredicted RBP18.43■□□□□ 0.54
PPFIA2-227ENST00000552948 TRIM26Q12899 539 aaPredicted RBP18.42■□□□□ 0.54
PPFIA2-227ENST00000552948 ZCCHC6Q5VYS8 1495 aaKnown RBP18.24■□□□□ 0.51
PPFIA2-227ENST00000552948 ZEB1P37275 1124 aaPredicted RBP18.22■□□□□ 0.51
PPFIA2-227ENST00000552948 TRIM41Q8WV44 630 aa18.18■□□□□ 0.5
PPFIA2-227ENST00000552948 PELP1Q8IZL8 1130 aaKnown RBP18.18■□□□□ 0.5
PPFIA2-227ENST00000552948 DCAF1Q9Y4B6 1507 aa18.13■□□□□ 0.49
PPFIA2-227ENST00000552948 TTBK1Q5TCY1 1321 aaPredicted RBP18.04■□□□□ 0.48
PPFIA2-227ENST00000552948 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
PPFIA2-227ENST00000552948 CCER1Q8TC90 406 aaPredicted RBP17.97■□□□□ 0.47
PPFIA2-227ENST00000552948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.89■□□□□ 0.45
PPFIA2-227ENST00000552948 CENPBP07199 599 aaPredicted RBP17.78■□□□□ 0.44
PPFIA2-227ENST00000552948 CCDC180Q9P1Z9 1646 aa17.74■□□□□ 0.43
PPFIA2-227ENST00000552948 YTHDC1Q96MU7 727 aaKnown RBP17.72■□□□□ 0.43
PPFIA2-227ENST00000552948 GTF3C3Q9Y5Q9 886 aa17.7■□□□□ 0.42
PPFIA2-227ENST00000552948 ACIN1Q9UKV3 1341 aaKnown RBP17.69■□□□□ 0.42
PPFIA2-227ENST00000552948 NEUROD1Q13562 356 aa17.68■□□□□ 0.42
PPFIA2-227ENST00000552948 DIEXFQ68CQ4 756 aaKnown RBP17.68■□□□□ 0.42
PPFIA2-227ENST00000552948 RSF1Q96T23 1441 aaPredicted RBP17.46■□□□□ 0.39
PPFIA2-227ENST00000552948 UBTFP17480 764 aaKnown RBP17.45■□□□□ 0.38
PPFIA2-227ENST00000552948 MYT1Q01538 1121 aa17.39■□□□□ 0.38
PPFIA2-227ENST00000552948 RANGAP1P46060 587 aaPredicted RBP17.38■□□□□ 0.37
PPFIA2-227ENST00000552948 SCRIBQ14160 1630 aa17.37■□□□□ 0.37
PPFIA2-227ENST00000552948 HNRNPUL2Q1KMD3 747 aaKnown RBP17.37■□□□□ 0.37
PPFIA2-227ENST00000552948 ZNF316A6NFI3 1004 aaPredicted RBP17.3■□□□□ 0.36
PPFIA2-227ENST00000552948 RB1CC1Q8TDY2 1594 aa17.27■□□□□ 0.35
PPFIA2-227ENST00000552948 APLP2Q06481 763 aa17.26■□□□□ 0.35
PPFIA2-227ENST00000552948 ABCC9O60706 1549 aa17.23■□□□□ 0.35
PPFIA2-227ENST00000552948 MIER1Q8N108 512 aa17.18■□□□□ 0.34
PPFIA2-227ENST00000552948 CECR2Q9BXF3 1484 aa17.1■□□□□ 0.33
PPFIA2-227ENST00000552948 CSRNP3Q8WYN3 585 aa17.05■□□□□ 0.32
PPFIA2-227ENST00000552948 CEP162Q5TB80 1403 aa17.01■□□□□ 0.31
PPFIA2-227ENST00000552948 MROH2BQ7Z745 1585 aa16.96■□□□□ 0.31
PPFIA2-227ENST00000552948 ITGAEP38570 1179 aa16.92■□□□□ 0.3
PPFIA2-227ENST00000552948 SOGA1O94964 1423 aa16.89■□□□□ 0.29
PPFIA2-227ENST00000552948 BCANQ96GW7 911 aa16.88■□□□□ 0.29
PPFIA2-227ENST00000552948 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
PPFIA2-227ENST00000552948 ABCC8Q09428 1581 aa16.84■□□□□ 0.29
PPFIA2-227ENST00000552948 TNIKQ9UKE5 1360 aa16.83■□□□□ 0.29
PPFIA2-227ENST00000552948 WIZO95785 1651 aa16.83■□□□□ 0.28
PPFIA2-227ENST00000552948 PABPN1Q86U42 306 aaKnown RBP eCLIP16.75■□□□□ 0.27
PPFIA2-227ENST00000552948 WRNQ14191 1432 aaPredicted RBP eCLIP16.74■□□□□ 0.27
PPFIA2-227ENST00000552948 SUPT16HQ9Y5B9 1047 aaKnown RBP16.73■□□□□ 0.27
PPFIA2-227ENST00000552948 RUSC2Q8N2Y8 1516 aa16.72■□□□□ 0.27
PPFIA2-227ENST00000552948 NEFLP07196 543 aa16.69■□□□□ 0.26
PPFIA2-227ENST00000552948 CLIP1P30622 1438 aa16.69■□□□□ 0.26
PPFIA2-227ENST00000552948 GOLGA3Q08378 1498 aa16.67■□□□□ 0.26
PPFIA2-227ENST00000552948 ATP1B4Q9UN42 357 aaPredicted RBP16.66■□□□□ 0.26
PPFIA2-227ENST00000552948 FKBP8Q14318 412 aa16.62■□□□□ 0.25
PPFIA2-227ENST00000552948 EEA1Q15075 1411 aa16.61■□□□□ 0.25
PPFIA2-227ENST00000552948 BAZ1AQ9NRL2 1556 aaPredicted RBP16.58■□□□□ 0.25
PPFIA2-227ENST00000552948 NACADO15069 1562 aa16.57■□□□□ 0.24
PPFIA2-227ENST00000552948 CLSPNQ9HAW4 1339 aa16.57■□□□□ 0.24
PPFIA2-227ENST00000552948 DDX10Q13206 875 aaKnown RBP16.56■□□□□ 0.24
PPFIA2-227ENST00000552948 TSHZ2Q9NRE2 1034 aa16.56■□□□□ 0.24
PPFIA2-227ENST00000552948 ANP32EQ9BTT0 268 aa16.54■□□□□ 0.24
PPFIA2-227ENST00000552948 KCNH8Q96L42 1107 aa16.54■□□□□ 0.24
PPFIA2-227ENST00000552948 ERICH6Q7L0X2 663 aa16.53■□□□□ 0.24
PPFIA2-227ENST00000552948 HIRIP3Q9BW71 556 aaPredicted RBP16.52■□□□□ 0.24
PPFIA2-227ENST00000552948 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
PPFIA2-227ENST00000552948 TRIM52Q96A61 297 aa16.5■□□□□ 0.23
PPFIA2-227ENST00000552948 FAM50AQ14320 339 aaKnown RBP16.49■□□□□ 0.23
PPFIA2-227ENST00000552948 VPS8Q8N3P4 1428 aa16.48■□□□□ 0.23
PPFIA2-227ENST00000552948 KANK4Q5T7N3 995 aaPredicted RBP16.47■□□□□ 0.23
PPFIA2-227ENST00000552948 TOP2AP11388 1531 aaKnown RBP16.44■□□□□ 0.22
PPFIA2-227ENST00000552948 DHX57Q6P158 1386 aaKnown RBP16.42■□□□□ 0.22
PPFIA2-227ENST00000552948 ANP32CO43423 234 aa16.39■□□□□ 0.21
PPFIA2-227ENST00000552948 SMARCA2P51531 1590 aa16.37■□□□□ 0.21
PPFIA2-227ENST00000552948 RAPGEF2Q9Y4G8 1499 aa16.37■□□□□ 0.21
PPFIA2-227ENST00000552948 SIN3AQ96ST3 1273 aa16.37■□□□□ 0.21
PPFIA2-227ENST00000552948 BCL11AQ9H165 835 aa16.36■□□□□ 0.21
PPFIA2-227ENST00000552948 P3H3Q8IVL6 736 aa16.35■□□□□ 0.21
PPFIA2-227ENST00000552948 IRX6P78412 446 aaPredicted RBP16.34■□□□□ 0.21
PPFIA2-227ENST00000552948 RBM19Q9Y4C8 960 aaKnown RBP16.3■□□□□ 0.2
PPFIA2-227ENST00000552948 CNGB1Q14028 1251 aaPredicted RBP16.29■□□□□ 0.2
PPFIA2-227ENST00000552948 SMARCA4P51532 1647 aa16.29■□□□□ 0.2
PPFIA2-227ENST00000552948 EIF4G1Q04637 1599 aaKnown RBP16.27■□□□□ 0.19
PPFIA2-227ENST00000552948 CCNB3Q8WWL7 1395 aa16.25■□□□□ 0.19
PPFIA2-227ENST00000552948 CDK11AQ9UQ88 783 aaPredicted RBP16.25■□□□□ 0.19
PPFIA2-227ENST00000552948 HNRNPUQ00839 825 aaKnown RBP eCLIP16.25■□□□□ 0.19
PPFIA2-227ENST00000552948 RAB3GAP2Q9H2M9 1393 aa16.2■□□□□ 0.18
PPFIA2-227ENST00000552948 KIF21BO75037 1637 aa16.2■□□□□ 0.18
PPFIA2-227ENST00000552948 SYNJ1O43426 1573 aa16.16■□□□□ 0.18
PPFIA2-227ENST00000552948 BAZ1BQ9UIG0 1483 aaKnown RBP16.14■□□□□ 0.17
PPFIA2-227ENST00000552948 TONSLQ96HA7 1378 aa16.13■□□□□ 0.17
PPFIA2-227ENST00000552948 POLR3GLQ9BT43 218 aa16.12■□□□□ 0.17
PPFIA2-227ENST00000552948 FAM9BQ8IZU0 186 aa16.08■□□□□ 0.16
PPFIA2-227ENST00000552948 SETD5Q9C0A6 1442 aa16.07■□□□□ 0.16
PPFIA2-227ENST00000552948 KIF27Q86VH2 1401 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms