RNA–Protein interactions for RNA: ENST00000262878.4

SAMHD1-201, Transcript of SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMHD1, Length 4,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMHD1-201ENST00000262878 NISCHQ9Y2I1 1504 aa21.49■■□□□ 1.03
SAMHD1-201ENST00000262878 DCAF8L2P0C7V8 631 aa20.13■□□□□ 0.81
SAMHD1-201ENST00000262878 SHROOM4Q9ULL8 1493 aa19.05■□□□□ 0.64
SAMHD1-201ENST00000262878 SUPT5HO00267 1087 aaKnown RBP18.88■□□□□ 0.61
SAMHD1-201ENST00000262878 ABCC9O60706 1549 aa18.31■□□□□ 0.52
SAMHD1-201ENST00000262878 CCDC180Q9P1Z9 1646 aa18.16■□□□□ 0.5
SAMHD1-201ENST00000262878 PCGF6Q9BYE7 350 aa18.08■□□□□ 0.48
SAMHD1-201ENST00000262878 PELP1Q8IZL8 1130 aaKnown RBP17.95■□□□□ 0.46
SAMHD1-201ENST00000262878 HRCP23327 699 aa17.9■□□□□ 0.46
SAMHD1-201ENST00000262878 ZCCHC6Q5VYS8 1495 aaKnown RBP17.86■□□□□ 0.45
SAMHD1-201ENST00000262878 PABPN1Q86U42 306 aaKnown RBP eCLIP17.76■□□□□ 0.43
SAMHD1-201ENST00000262878 EHMT2Q96KQ7 1210 aa17.71■□□□□ 0.43
SAMHD1-201ENST00000262878 TRIM41Q8WV44 630 aa17.66■□□□□ 0.42
SAMHD1-201ENST00000262878 ZEB1P37275 1124 aaPredicted RBP17.63■□□□□ 0.41
SAMHD1-201ENST00000262878 FAM9AQ8IZU1 332 aaPredicted RBP17.63■□□□□ 0.41
SAMHD1-201ENST00000262878 MYT1Q01538 1121 aa17.51■□□□□ 0.39
SAMHD1-201ENST00000262878 SCRIBQ14160 1630 aa17.49■□□□□ 0.39
SAMHD1-201ENST00000262878 PPARGC1BQ86YN6 1023 aaKnown RBP17.48■□□□□ 0.39
SAMHD1-201ENST00000262878 RB1CC1Q8TDY2 1594 aa17.45■□□□□ 0.38
SAMHD1-201ENST00000262878 CENPBP07199 599 aaPredicted RBP17.42■□□□□ 0.38
SAMHD1-201ENST00000262878 NACADO15069 1562 aa17.41■□□□□ 0.38
SAMHD1-201ENST00000262878 TRIM26Q12899 539 aaPredicted RBP17.38■□□□□ 0.37
SAMHD1-201ENST00000262878 CHIC1Q5VXU3 224 aa17.36■□□□□ 0.37
SAMHD1-201ENST00000262878 APLP2Q06481 763 aa17.35■□□□□ 0.37
SAMHD1-201ENST00000262878 DCAF1Q9Y4B6 1507 aa17.34■□□□□ 0.37
SAMHD1-201ENST00000262878 UBTFP17480 764 aaKnown RBP17.23■□□□□ 0.35
SAMHD1-201ENST00000262878 CCER1Q8TC90 406 aaPredicted RBP17.2■□□□□ 0.34
SAMHD1-201ENST00000262878 RANGAP1P46060 587 aaPredicted RBP17.18■□□□□ 0.34
SAMHD1-201ENST00000262878 LOC105371045A0A1W2PR82 267 aa17.16■□□□□ 0.34
SAMHD1-201ENST00000262878 MYO15BQ96JP2 1530 aa17.03■□□□□ 0.32
SAMHD1-201ENST00000262878 TTBK1Q5TCY1 1321 aaPredicted RBP17.03■□□□□ 0.32
SAMHD1-201ENST00000262878 ATP1B4Q9UN42 357 aaPredicted RBP16.97■□□□□ 0.31
SAMHD1-201ENST00000262878 YTHDC1Q96MU7 727 aaKnown RBP16.96■□□□□ 0.31
SAMHD1-201ENST00000262878 RSF1Q96T23 1441 aaPredicted RBP16.93■□□□□ 0.3
SAMHD1-201ENST00000262878 BAZ1AQ9NRL2 1556 aaPredicted RBP16.8■□□□□ 0.28
SAMHD1-201ENST00000262878 CECR2Q9BXF3 1484 aa16.78■□□□□ 0.28
SAMHD1-201ENST00000262878 DIEXFQ68CQ4 756 aaKnown RBP16.77■□□□□ 0.28
SAMHD1-201ENST00000262878 GTF3C3Q9Y5Q9 886 aa16.76■□□□□ 0.27
SAMHD1-201ENST00000262878 ACIN1Q9UKV3 1341 aaKnown RBP16.72■□□□□ 0.27
SAMHD1-201ENST00000262878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.71■□□□□ 0.27
SAMHD1-201ENST00000262878 BAZ1BQ9UIG0 1483 aaKnown RBP16.71■□□□□ 0.27
SAMHD1-201ENST00000262878 SCAF1Q9H7N4 1312 aaKnown RBP16.68■□□□□ 0.26
SAMHD1-201ENST00000262878 CSRNP3Q8WYN3 585 aa16.65■□□□□ 0.26
SAMHD1-201ENST00000262878 ERICH6Q7L0X2 663 aa16.62■□□□□ 0.25
SAMHD1-201ENST00000262878 MROH2BQ7Z745 1585 aa16.6■□□□□ 0.25
SAMHD1-201ENST00000262878 HNRNPUL2Q1KMD3 747 aaKnown RBP16.59■□□□□ 0.25
SAMHD1-201ENST00000262878 NEFLP07196 543 aa16.52■□□□□ 0.24
SAMHD1-201ENST00000262878 FBLN2P98095 1184 aa16.51■□□□□ 0.23
SAMHD1-201ENST00000262878 SMARCA2P51531 1590 aa16.48■□□□□ 0.23
SAMHD1-201ENST00000262878 NEUROD1Q13562 356 aa16.46■□□□□ 0.23
SAMHD1-201ENST00000262878 WRNQ14191 1432 aaPredicted RBP eCLIP16.4■□□□□ 0.22
SAMHD1-201ENST00000262878 ZNF316A6NFI3 1004 aaPredicted RBP16.38■□□□□ 0.21
SAMHD1-201ENST00000262878 ITGAEP38570 1179 aa16.38■□□□□ 0.21
SAMHD1-201ENST00000262878 CCDC88BA6NC98 1476 aa16.36■□□□□ 0.21
SAMHD1-201ENST00000262878 SMARCA4P51532 1647 aa16.35■□□□□ 0.21
SAMHD1-201ENST00000262878 WIZO95785 1651 aa16.35■□□□□ 0.21
SAMHD1-201ENST00000262878 ATAD2BQ9ULI0 1458 aa16.34■□□□□ 0.21
SAMHD1-201ENST00000262878 TOP2AP11388 1531 aaKnown RBP16.32■□□□□ 0.2
SAMHD1-201ENST00000262878 P3H3Q8IVL6 736 aa16.3■□□□□ 0.2
SAMHD1-201ENST00000262878 EEA1Q15075 1411 aa16.29■□□□□ 0.2
SAMHD1-201ENST00000262878 MYT1LQ9UL68 1186 aa16.25■□□□□ 0.19
SAMHD1-201ENST00000262878 ERCC6Q03468 1493 aa16.21■□□□□ 0.19
SAMHD1-201ENST00000262878 KIF27Q86VH2 1401 aa16.2■□□□□ 0.18
SAMHD1-201ENST00000262878 FAM50AQ14320 339 aaKnown RBP16.2■□□□□ 0.18
SAMHD1-201ENST00000262878 CHMP7Q8WUX9 453 aaPredicted RBP16.18■□□□□ 0.18
SAMHD1-201ENST00000262878 CADPSQ9ULU8 1353 aa16.17■□□□□ 0.18
SAMHD1-201ENST00000262878 PDS5BQ9NTI5 1447 aa16.16■□□□□ 0.18
SAMHD1-201ENST00000262878 EIF4G1Q04637 1599 aaKnown RBP16.12■□□□□ 0.17
SAMHD1-201ENST00000262878 CLSPNQ9HAW4 1339 aa16.11■□□□□ 0.17
SAMHD1-201ENST00000262878 GOLGA3Q08378 1498 aa16.11■□□□□ 0.17
SAMHD1-201ENST00000262878 ARID3CA6NKF2 412 aa16.11■□□□□ 0.17
SAMHD1-201ENST00000262878 CDK11AQ9UQ88 783 aaPredicted RBP16.11■□□□□ 0.17
SAMHD1-201ENST00000262878 NCAPD3P42695 1498 aa16.11■□□□□ 0.17
SAMHD1-201ENST00000262878 BCANQ96GW7 911 aa16.1■□□□□ 0.17
SAMHD1-201ENST00000262878 ABCC8Q09428 1581 aa16.06■□□□□ 0.16
SAMHD1-201ENST00000262878 CLIP1P30622 1438 aa16.06■□□□□ 0.16
SAMHD1-201ENST00000262878 CEP164Q9UPV0 1460 aa16.05■□□□□ 0.16
SAMHD1-201ENST00000262878 CUX2O14529 1486 aa16.03■□□□□ 0.16
SAMHD1-201ENST00000262878 SOGA1O94964 1423 aa16.03■□□□□ 0.16
SAMHD1-201ENST00000262878 BICRAQ9NZM4 1560 aa16.02■□□□□ 0.16
SAMHD1-201ENST00000262878 TNIKQ9UKE5 1360 aa16.01■□□□□ 0.15
SAMHD1-201ENST00000262878 MIER1Q8N108 512 aa16■□□□□ 0.15
SAMHD1-201ENST00000262878 CEP162Q5TB80 1403 aa15.98■□□□□ 0.15
SAMHD1-201ENST00000262878 CARMIL1Q5VZK9 1371 aa15.97■□□□□ 0.15
SAMHD1-201ENST00000262878 TRIM52Q96A61 297 aa15.96■□□□□ 0.15
SAMHD1-201ENST00000262878 NPM1P06748 294 aaKnown RBP eCLIP15.94■□□□□ 0.14
SAMHD1-201ENST00000262878 FANCD2Q9BXW9 1451 aa15.92■□□□□ 0.14
SAMHD1-201ENST00000262878 ZNF777Q9ULD5 760 aaPredicted RBP15.91■□□□□ 0.14
SAMHD1-201ENST00000262878 TDRD9Q8NDG6 1382 aaKnown RBP15.89■□□□□ 0.13
SAMHD1-201ENST00000262878 CC2D2AQ9P2K1 1620 aa15.87■□□□□ 0.13
SAMHD1-201ENST00000262878 MTUS2Q5JR59 1369 aa15.86■□□□□ 0.13
SAMHD1-201ENST00000262878 HMGXB3Q12766 1538 aa15.86■□□□□ 0.13
SAMHD1-201ENST00000262878 RTL5Q5HYW3 569 aaPredicted RBP15.84■□□□□ 0.13
SAMHD1-201ENST00000262878 FKBP8Q14318 412 aa15.84■□□□□ 0.13
SAMHD1-201ENST00000262878 ANP32EQ9BTT0 268 aa15.83■□□□□ 0.13
SAMHD1-201ENST00000262878 ANP32CO43423 234 aa15.81■□□□□ 0.12
SAMHD1-201ENST00000262878 UNC13AQ9UPW8 1703 aa15.8■□□□□ 0.12
SAMHD1-201ENST00000262878 CFTRP13569 1480 aa15.78■□□□□ 0.12
SAMHD1-201ENST00000262878 PLEKHD1A6NEE1 506 aa15.76■□□□□ 0.11
SAMHD1-201ENST00000262878 FHAD1B1AJZ9 1412 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms