Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.27□□□□□ -0.29
SOX2P48431 AC022447.6-201ENST00000515522 438 ntBASIC13.27□□□□□ -0.29
SOX2P48431 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.27□□□□□ -0.29
SOX2P48431 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SOX2P48431 AL512361.1-201ENST00000554200 418 ntBASIC13.27□□□□□ -0.29
SOX2P48431 AC074044.1-201ENST00000609673 707 ntBASIC13.27□□□□□ -0.29
SOX2P48431 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 AL109936.8-201ENST00000641772 604 ntBASIC13.27□□□□□ -0.29
SOX2P48431 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SOX2P48431 AL360270.3-201ENST00000609118 1348 ntBASIC13.27□□□□□ -0.29
SOX2P48431 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.27□□□□□ -0.29
SOX2P48431 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.27□□□□□ -0.29
SOX2P48431 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.27□□□□□ -0.29
SOX2P48431 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.27□□□□□ -0.29
SOX2P48431 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.27□□□□□ -0.29
SOX2P48431 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.27□□□□□ -0.29
SOX2P48431 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SOX2P48431 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
SOX2P48431 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SOX2P48431 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SOX2P48431 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SOX2P48431 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SOX2P48431 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
SOX2P48431 AL022342.1-201ENST00000400363 863 ntBASIC13.26□□□□□ -0.29
SOX2P48431 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.26□□□□□ -0.29
SOX2P48431 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.26□□□□□ -0.29
SOX2P48431 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.26□□□□□ -0.29
SOX2P48431 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.26□□□□□ -0.29
SOX2P48431 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.26□□□□□ -0.29
SOX2P48431 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.26□□□□□ -0.29
SOX2P48431 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.26□□□□□ -0.29
SOX2P48431 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SOX2P48431 TPT1P11-201ENST00000458482 498 ntBASIC13.26□□□□□ -0.29
SOX2P48431 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.26□□□□□ -0.29
SOX2P48431 RN7SL618P-201ENST00000477850 296 ntBASIC13.26□□□□□ -0.29
SOX2P48431 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.26□□□□□ -0.29
SOX2P48431 YBX1P5-201ENST00000509441 847 ntBASIC13.26□□□□□ -0.29
SOX2P48431 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
SOX2P48431 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SOX2P48431 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.26□□□□□ -0.29
SOX2P48431 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.26□□□□□ -0.29
SOX2P48431 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SOX2P48431 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SOX2P48431 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SOX2P48431 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.26□□□□□ -0.29
SOX2P48431 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
SOX2P48431 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.26□□□□□ -0.29
SOX2P48431 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.26□□□□□ -0.29
SOX2P48431 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.26□□□□□ -0.29
SOX2P48431 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.26□□□□□ -0.29
SOX2P48431 AC018665.1-201ENST00000622927 1362 ntBASIC13.26□□□□□ -0.29
SOX2P48431 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
SOX2P48431 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SOX2P48431 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.26□□□□□ -0.29
SOX2P48431 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOX2P48431 AC107918.4-201ENST00000641966 3141 ntBASIC13.26□□□□□ -0.29
SOX2P48431 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms