Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHRNA5P30532 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.04■□□□□ 0.48
CHRNA5P30532 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC18.04■□□□□ 0.48
CHRNA5P30532 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC18.04■□□□□ 0.48
CHRNA5P30532 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC18.04■□□□□ 0.48
CHRNA5P30532 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC18.04■□□□□ 0.48
CHRNA5P30532 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 AC244197.1-201ENST00000456494 951 ntBASIC18.04■□□□□ 0.48
CHRNA5P30532 RN7SL494P-201ENST00000461517 304 ntBASIC18.04■□□□□ 0.48
CHRNA5P30532 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC18.04■□□□□ 0.48
CHRNA5P30532 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CHRNA5P30532 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC18.04■□□□□ 0.48
CHRNA5P30532 KRT8P1-201ENST00000557533 1207 ntBASIC18.04■□□□□ 0.48
CHRNA5P30532 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
CHRNA5P30532 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC18.04■□□□□ 0.48
CHRNA5P30532 PLS3-210ENST00000626746 216 ntTSL 4 BASIC18.04■□□□□ 0.48
CHRNA5P30532 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.04■□□□□ 0.48
CHRNA5P30532 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC18.04■□□□□ 0.48
CHRNA5P30532 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHRNA5P30532 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHRNA5P30532 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CHRNA5P30532 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.04■□□□□ 0.48
CHRNA5P30532 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA5P30532 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CHRNA5P30532 AC006372.4-201ENST00000624122 1543 ntBASIC18.03■□□□□ 0.48
CHRNA5P30532 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.03■□□□□ 0.48
CHRNA5P30532 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC18.03■□□□□ 0.48
CHRNA5P30532 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC18.03■□□□□ 0.48
CHRNA5P30532 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CHRNA5P30532 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CHRNA5P30532 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 AC025183.3-201ENST00000623526 1482 ntBASIC18.03■□□□□ 0.48
CHRNA5P30532 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.03■□□□□ 0.48
CHRNA5P30532 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC18.03■□□□□ 0.48
CHRNA5P30532 MIR645-201ENST00000385283 94 ntBASIC18.03■□□□□ 0.48
CHRNA5P30532 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC18.03■□□□□ 0.48
CHRNA5P30532 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 CSNK1G2P1-201ENST00000442675 955 ntBASIC18.03■□□□□ 0.48
CHRNA5P30532 RGS5-216ENST00000449680 788 ntTSL 3 BASIC18.03■□□□□ 0.48
CHRNA5P30532 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC18.03■□□□□ 0.48
CHRNA5P30532 AC093826.1-201ENST00000508655 993 ntBASIC18.03■□□□□ 0.48
CHRNA5P30532 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC18.03■□□□□ 0.48
CHRNA5P30532 TREHP1-201ENST00000531328 465 ntBASIC18.03■□□□□ 0.48
CHRNA5P30532 OR5BD1P-201ENST00000532527 817 ntBASIC18.03■□□□□ 0.48
CHRNA5P30532 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.03■□□□□ 0.48
CHRNA5P30532 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.03■□□□□ 0.48
CHRNA5P30532 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.03■□□□□ 0.48
CHRNA5P30532 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.03■□□□□ 0.48
CHRNA5P30532 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.03■□□□□ 0.48
CHRNA5P30532 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 HYMAI-201ENST00000635591 3347 ntBASIC18.03■□□□□ 0.48
CHRNA5P30532 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.03■□□□□ 0.48
CHRNA5P30532 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHRNA5P30532 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.03■□□□□ 0.48
CHRNA5P30532 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHRNA5P30532 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.02■□□□□ 0.48
CHRNA5P30532 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHRNA5P30532 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHRNA5P30532 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHRNA5P30532 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CHRNA5P30532 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHRNA5P30532 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHRNA5P30532 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
CHRNA5P30532 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHRNA5P30532 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms