Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MMP11P24347 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.25□□□□□ -0.13
MMP11P24347 ACE3P-201ENST00000423435 1973 ntBASIC14.25□□□□□ -0.13
MMP11P24347 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
MMP11P24347 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
MMP11P24347 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
MMP11P24347 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
MMP11P24347 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
MMP11P24347 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 AL161772.1-201ENST00000610494 4412 ntBASIC14.25□□□□□ -0.13
MMP11P24347 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.25□□□□□ -0.13
MMP11P24347 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.25□□□□□ -0.13
MMP11P24347 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
MMP11P24347 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.25□□□□□ -0.13
MMP11P24347 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.25□□□□□ -0.13
MMP11P24347 Z93015.1-201ENST00000451718 390 ntBASIC14.25□□□□□ -0.13
MMP11P24347 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.25□□□□□ -0.13
MMP11P24347 AC108725.1-201ENST00000495472 409 ntBASIC14.25□□□□□ -0.13
MMP11P24347 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.25□□□□□ -0.13
MMP11P24347 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.25□□□□□ -0.13
MMP11P24347 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.25□□□□□ -0.13
MMP11P24347 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.25□□□□□ -0.13
MMP11P24347 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.25□□□□□ -0.13
MMP11P24347 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.25□□□□□ -0.13
MMP11P24347 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.25□□□□□ -0.13
MMP11P24347 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.25□□□□□ -0.13
MMP11P24347 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.25□□□□□ -0.13
MMP11P24347 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.25□□□□□ -0.13
MMP11P24347 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.25□□□□□ -0.13
MMP11P24347 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
MMP11P24347 AL354989.2-201ENST00000435838 1540 ntBASIC14.25□□□□□ -0.13
MMP11P24347 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
MMP11P24347 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
MMP11P24347 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MMP11P24347 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MMP11P24347 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.24□□□□□ -0.13
MMP11P24347 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MMP11P24347 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
MMP11P24347 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MMP11P24347 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MMP11P24347 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.24□□□□□ -0.13
MMP11P24347 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.24□□□□□ -0.13
MMP11P24347 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 FAM86HP-204ENST00000513466 959 ntBASIC14.24□□□□□ -0.13
MMP11P24347 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
MMP11P24347 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.24□□□□□ -0.13
MMP11P24347 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.24□□□□□ -0.13
MMP11P24347 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.24□□□□□ -0.13
MMP11P24347 AC091271.1-201ENST00000611877 1162 ntBASIC14.24□□□□□ -0.13
MMP11P24347 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.24□□□□□ -0.13
MMP11P24347 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.24□□□□□ -0.13
MMP11P24347 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MMP11P24347 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
MMP11P24347 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MMP11P24347 AL359258.3-201ENST00000622910 2331 ntBASIC14.24□□□□□ -0.13
MMP11P24347 AC140479.7-201ENST00000636301 2332 ntBASIC14.24□□□□□ -0.13
MMP11P24347 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
MMP11P24347 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms