Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD58P19256 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.13■□□□□ 0.17
CD58P19256 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD58P19256 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CD58P19256 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.12■□□□□ 0.17
CD58P19256 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.12■□□□□ 0.17
CD58P19256 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CD58P19256 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.12■□□□□ 0.17
CD58P19256 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CD58P19256 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.12■□□□□ 0.17
CD58P19256 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CD58P19256 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.12■□□□□ 0.17
CD58P19256 FAM197Y7-201ENST00000432892 766 ntBASIC16.12■□□□□ 0.17
CD58P19256 AC016694.1-201ENST00000434179 700 ntBASIC16.12■□□□□ 0.17
CD58P19256 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.12■□□□□ 0.17
CD58P19256 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
CD58P19256 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CD58P19256 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CD58P19256 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.12■□□□□ 0.17
CD58P19256 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.12■□□□□ 0.17
CD58P19256 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.12■□□□□ 0.17
CD58P19256 ENPP7P14-201ENST00000621765 1040 ntBASIC16.12■□□□□ 0.17
CD58P19256 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.12■□□□□ 0.17
CD58P19256 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CD58P19256 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CD58P19256 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.12■□□□□ 0.17
CD58P19256 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 FAM45BP-202ENST00000592932 1624 ntBASIC16.12■□□□□ 0.17
CD58P19256 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD58P19256 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD58P19256 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CD58P19256 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CD58P19256 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD58P19256 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CD58P19256 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD58P19256 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.11■□□□□ 0.17
CD58P19256 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CD58P19256 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD58P19256 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD58P19256 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD58P19256 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD58P19256 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD58P19256 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CD58P19256 MTHFR-210ENST00000641407 2387 ntBASIC16.11■□□□□ 0.17
CD58P19256 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD58P19256 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD58P19256 TPM3P8-201ENST00000330554 643 ntBASIC16.11■□□□□ 0.17
CD58P19256 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.11■□□□□ 0.17
CD58P19256 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.11■□□□□ 0.17
CD58P19256 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD58P19256 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD58P19256 AC245100.3-201ENST00000441281 285 ntBASIC16.11■□□□□ 0.17
CD58P19256 AC234783.1-201ENST00000441761 496 ntBASIC16.11■□□□□ 0.17
CD58P19256 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.11■□□□□ 0.17
CD58P19256 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CD58P19256 RAB43P1-201ENST00000561790 589 ntBASIC16.11■□□□□ 0.17
CD58P19256 AL603764.1-201ENST00000636452 321 ntBASIC16.11■□□□□ 0.17
CD58P19256 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD58P19256 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD58P19256 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD58P19256 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.11■□□□□ 0.17
CD58P19256 SNX18-202ENST00000343017 3140 ntBASIC16.11■□□□□ 0.17
CD58P19256 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.11■□□□□ 0.17
CD58P19256 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CD58P19256 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.11■□□□□ 0.17
CD58P19256 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD58P19256 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CD58P19256 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD58P19256 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CD58P19256 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD58P19256 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CD58P19256 AC018442.1-201ENST00000421439 2061 ntBASIC16.1■□□□□ 0.17
CD58P19256 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.1■□□□□ 0.17
CD58P19256 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.1■□□□□ 0.17
CD58P19256 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CD58P19256 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CD58P19256 PDIA3P1-201ENST00000471856 1510 ntBASIC16.1■□□□□ 0.17
CD58P19256 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD58P19256 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms