Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 LINC01101-201ENST00000622953 1884 ntBASIC12.4□□□□□ -0.42
CCL3L1P16619 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL3L1P16619 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CCL3L1P16619 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CCL3L1P16619 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CCL3L1P16619 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL3L1P16619 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CCL3L1P16619 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 AC018442.1-201ENST00000421439 2061 ntBASIC12.39□□□□□ -0.43
CCL3L1P16619 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.39□□□□□ -0.43
CCL3L1P16619 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CCL3L1P16619 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CCL3L1P16619 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CCL3L1P16619 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL3L1P16619 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL3L1P16619 PDIA3P1-201ENST00000471856 1510 ntBASIC12.39□□□□□ -0.43
CCL3L1P16619 MTHFR-210ENST00000641407 2387 ntBASIC12.39□□□□□ -0.43
CCL3L1P16619 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
CCL3L1P16619 POM121L8P-201ENST00000417732 1281 ntBASIC12.39□□□□□ -0.43
CCL3L1P16619 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.39□□□□□ -0.43
CCL3L1P16619 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL3L1P16619 POM121L9P-203ENST00000441984 1285 ntBASIC12.39□□□□□ -0.43
CCL3L1P16619 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.39□□□□□ -0.43
CCL3L1P16619 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.39□□□□□ -0.43
CCL3L1P16619 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CCL3L1P16619 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL3L1P16619 HILS1-202ENST00000545329 423 ntBASIC12.39□□□□□ -0.43
CCL3L1P16619 KRT90P-201ENST00000549264 1064 ntBASIC12.39□□□□□ -0.43
CCL3L1P16619 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 AC239800.4-201ENST00000603712 296 ntBASIC12.39□□□□□ -0.43
CCL3L1P16619 AC138951.2-201ENST00000623455 1161 ntBASIC12.39□□□□□ -0.43
CCL3L1P16619 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL3L1P16619 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.39□□□□□ -0.43
CCL3L1P16619 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CCL3L1P16619 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL3L1P16619 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL3L1P16619 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 CLUHP2-201ENST00000426660 1303 ntBASIC12.38□□□□□ -0.43
CCL3L1P16619 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.38□□□□□ -0.43
CCL3L1P16619 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CCL3L1P16619 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.38□□□□□ -0.43
CCL3L1P16619 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CCL3L1P16619 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.38□□□□□ -0.43
CCL3L1P16619 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 AC079776.1-201ENST00000401540 1152 ntBASIC12.38□□□□□ -0.43
CCL3L1P16619 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.38□□□□□ -0.43
CCL3L1P16619 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.38□□□□□ -0.43
CCL3L1P16619 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.38□□□□□ -0.43
CCL3L1P16619 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.38□□□□□ -0.43
CCL3L1P16619 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 AC078819.1-201ENST00000547454 765 ntBASIC12.38□□□□□ -0.43
CCL3L1P16619 AC012085.1-201ENST00000548270 765 ntBASIC12.38□□□□□ -0.43
CCL3L1P16619 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.38□□□□□ -0.43
CCL3L1P16619 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.38□□□□□ -0.43
CCL3L1P16619 AC106886.1-201ENST00000568660 600 ntBASIC12.38□□□□□ -0.43
CCL3L1P16619 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CCL3L1P16619 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms