Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CDH1P12830 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH1P12830 AC117489.1-201ENST00000625169 3217 ntBASIC14.66□□□□□ -0.06
CDH1P12830 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CDH1P12830 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH1P12830 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH1P12830 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH1P12830 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH1P12830 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH1P12830 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH1P12830 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH1P12830 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CDH1P12830 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH1P12830 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH1P12830 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH1P12830 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH1P12830 AC114812.1-204ENST00000449669 728 ntBASIC14.66□□□□□ -0.06
CDH1P12830 RN7SL837P-201ENST00000463010 287 ntBASIC14.66□□□□□ -0.06
CDH1P12830 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH1P12830 AC011495.1-201ENST00000498085 584 ntBASIC14.66□□□□□ -0.06
CDH1P12830 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH1P12830 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CDH1P12830 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CDH1P12830 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH1P12830 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CDH1P12830 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CDH1P12830 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH1P12830 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH1P12830 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH1P12830 AC010319.3-201ENST00000597028 470 ntBASIC14.66□□□□□ -0.06
CDH1P12830 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH1P12830 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CDH1P12830 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH1P12830 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH1P12830 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CDH1P12830 MSTO2P-201ENST00000314835 1709 ntBASIC14.66□□□□□ -0.06
CDH1P12830 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.66□□□□□ -0.06
CDH1P12830 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH1P12830 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH1P12830 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH1P12830 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CDH1P12830 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDH1P12830 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH1P12830 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
CDH1P12830 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CDH1P12830 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CDH1P12830 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH1P12830 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CDH1P12830 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH1P12830 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH1P12830 INTS4P1-203ENST00000641008 3683 ntBASIC14.65□□□□□ -0.06
CDH1P12830 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 HSPA7-201ENST00000445535 1927 ntBASIC14.65□□□□□ -0.06
CDH1P12830 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
CDH1P12830 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDH1P12830 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH1P12830 ACKR1-201ENST00000368121 1240 ntBASIC14.65□□□□□ -0.06
CDH1P12830 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH1P12830 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH1P12830 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH1P12830 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH1P12830 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH1P12830 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH1P12830 INE1-201ENST00000456273 945 ntBASIC14.65□□□□□ -0.06
CDH1P12830 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CDH1P12830 KRT18P25-201ENST00000508931 1278 ntBASIC14.65□□□□□ -0.06
CDH1P12830 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH1P12830 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH1P12830 TDH-203ENST00000531764 1110 ntBASIC14.65□□□□□ -0.06
CDH1P12830 AC009486.1-201ENST00000569860 813 ntBASIC14.65□□□□□ -0.06
CDH1P12830 MIR5189-201ENST00000577370 114 ntBASIC14.65□□□□□ -0.06
CDH1P12830 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH1P12830 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CDH1P12830 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDH1P12830 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH1P12830 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH1P12830 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH1P12830 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH1P12830 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDH1P12830 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH1P12830 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
CDH1P12830 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms