Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.62■□□□□ 0.25
COL11A1P12107 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
COL11A1P12107 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
COL11A1P12107 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.62■□□□□ 0.25
COL11A1P12107 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.62■□□□□ 0.25
COL11A1P12107 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 AC018529.2-202ENST00000611482 3087 ntBASIC16.62■□□□□ 0.25
COL11A1P12107 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COL11A1P12107 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COL11A1P12107 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL11A1P12107 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
COL11A1P12107 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL11A1P12107 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL11A1P12107 AC079112.1-201ENST00000454972 939 ntBASIC16.61■□□□□ 0.25
COL11A1P12107 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.61■□□□□ 0.25
COL11A1P12107 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.61■□□□□ 0.25
COL11A1P12107 AC023157.3-201ENST00000619086 2088 ntBASIC16.61■□□□□ 0.25
COL11A1P12107 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL11A1P12107 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL11A1P12107 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL11A1P12107 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL11A1P12107 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL11A1P12107 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.61■□□□□ 0.25
COL11A1P12107 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
COL11A1P12107 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL11A1P12107 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
COL11A1P12107 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL11A1P12107 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.61■□□□□ 0.25
COL11A1P12107 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL11A1P12107 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.61■□□□□ 0.25
COL11A1P12107 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.61■□□□□ 0.25
COL11A1P12107 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
COL11A1P12107 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL11A1P12107 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
COL11A1P12107 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL11A1P12107 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
COL11A1P12107 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL11A1P12107 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COL11A1P12107 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.61■□□□□ 0.25
COL11A1P12107 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.61■□□□□ 0.25
COL11A1P12107 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.61■□□□□ 0.25
COL11A1P12107 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL11A1P12107 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COL11A1P12107 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL11A1P12107 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.6■□□□□ 0.25
COL11A1P12107 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL11A1P12107 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.6■□□□□ 0.25
COL11A1P12107 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
COL11A1P12107 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL11A1P12107 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.6■□□□□ 0.25
COL11A1P12107 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.6■□□□□ 0.25
COL11A1P12107 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.6■□□□□ 0.25
COL11A1P12107 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL11A1P12107 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.6■□□□□ 0.25
COL11A1P12107 BRD7P5-201ENST00000299197 1822 ntBASIC16.6■□□□□ 0.25
COL11A1P12107 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL11A1P12107 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL11A1P12107 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.6■□□□□ 0.25
COL11A1P12107 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL11A1P12107 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
COL11A1P12107 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COL11A1P12107 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.6■□□□□ 0.25
COL11A1P12107 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL11A1P12107 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
COL11A1P12107 AL591122.2-201ENST00000624125 1853 ntBASIC16.6■□□□□ 0.25
COL11A1P12107 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL11A1P12107 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
COL11A1P12107 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
COL11A1P12107 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COL11A1P12107 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.6■□□□□ 0.25
COL11A1P12107 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL11A1P12107 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL11A1P12107 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
COL11A1P12107 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL11A1P12107 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
COL11A1P12107 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
COL11A1P12107 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL11A1P12107 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL11A1P12107 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
COL11A1P12107 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
COL11A1P12107 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL11A1P12107 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.59■□□□□ 0.25
COL11A1P12107 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL11A1P12107 PIN4P1-201ENST00000451079 396 ntBASIC16.59■□□□□ 0.25
COL11A1P12107 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.59■□□□□ 0.25
COL11A1P12107 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
COL11A1P12107 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
COL11A1P12107 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.59■□□□□ 0.25
COL11A1P12107 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
COL11A1P12107 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL11A1P12107 IL9RP3-201ENST00000442856 1674 ntBASIC16.59■□□□□ 0.25
COL11A1P12107 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.59■□□□□ 0.25
COL11A1P12107 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COL11A1P12107 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms