Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.6□□□□□ -0.07
LINGO3P0C6S8 TMEM198B-204ENST00000484016 896 ntBASIC14.6□□□□□ -0.07
LINGO3P0C6S8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 AC051619.7-201ENST00000568314 623 ntBASIC14.6□□□□□ -0.07
LINGO3P0C6S8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 RN7SL828P-201ENST00000607615 303 ntBASIC14.6□□□□□ -0.07
LINGO3P0C6S8 AL133215.2-201ENST00000609242 977 ntBASIC14.6□□□□□ -0.07
LINGO3P0C6S8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 AC018892.3-201ENST00000623986 2499 ntBASIC14.6□□□□□ -0.07
LINGO3P0C6S8 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 TUBB3P1-201ENST00000405796 1332 ntBASIC14.6□□□□□ -0.07
LINGO3P0C6S8 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINGO3P0C6S8 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINGO3P0C6S8 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINGO3P0C6S8 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
LINGO3P0C6S8 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LINGO3P0C6S8 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINGO3P0C6S8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.58□□□□□ -0.07
LINGO3P0C6S8 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LINGO3P0C6S8 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
LINGO3P0C6S8 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LINGO3P0C6S8 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINGO3P0C6S8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINGO3P0C6S8 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LINGO3P0C6S8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINGO3P0C6S8 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINGO3P0C6S8 AC011700.1-201ENST00000610409 2627 ntBASIC14.58□□□□□ -0.08
LINGO3P0C6S8 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINGO3P0C6S8 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.58□□□□□ -0.08
LINGO3P0C6S8 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
LINGO3P0C6S8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINGO3P0C6S8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINGO3P0C6S8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINGO3P0C6S8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINGO3P0C6S8 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.58□□□□□ -0.08
LINGO3P0C6S8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.58□□□□□ -0.08
LINGO3P0C6S8 KLF2P3-201ENST00000451977 1087 ntBASIC14.58□□□□□ -0.08
LINGO3P0C6S8 PHKG1P2-201ENST00000457537 863 ntBASIC14.58□□□□□ -0.08
LINGO3P0C6S8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms