Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHGBP05060 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CHGBP05060 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
CHGBP05060 AC023908.3-201ENST00000564211 3047 ntBASIC17.91■□□□□ 0.46
CHGBP05060 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHGBP05060 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHGBP05060 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHGBP05060 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.91■□□□□ 0.46
CHGBP05060 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CHGBP05060 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHGBP05060 FER1L4-210ENST00000615531 5998 ntBASIC17.91■□□□□ 0.46
CHGBP05060 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHGBP05060 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHGBP05060 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CHGBP05060 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.91■□□□□ 0.46
CHGBP05060 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHGBP05060 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHGBP05060 AL136309.1-201ENST00000403917 691 ntBASIC17.91■□□□□ 0.46
CHGBP05060 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.91■□□□□ 0.46
CHGBP05060 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CHGBP05060 HSPB1P2-201ENST00000448722 546 ntBASIC17.91■□□□□ 0.46
CHGBP05060 AL591846.1-201ENST00000451736 433 ntBASIC17.91■□□□□ 0.46
CHGBP05060 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.91■□□□□ 0.46
CHGBP05060 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHGBP05060 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.91■□□□□ 0.46
CHGBP05060 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.91■□□□□ 0.46
CHGBP05060 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CHGBP05060 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.91■□□□□ 0.46
CHGBP05060 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHGBP05060 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.91■□□□□ 0.46
CHGBP05060 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.91■□□□□ 0.46
CHGBP05060 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHGBP05060 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHGBP05060 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.91■□□□□ 0.46
CHGBP05060 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHGBP05060 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CHGBP05060 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHGBP05060 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHGBP05060 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.91■□□□□ 0.46
CHGBP05060 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CHGBP05060 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CHGBP05060 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.91■□□□□ 0.46
CHGBP05060 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CHGBP05060 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 AC015818.8-201ENST00000587907 1519 ntBASIC17.9■□□□□ 0.46
CHGBP05060 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.9■□□□□ 0.46
CHGBP05060 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.9■□□□□ 0.46
CHGBP05060 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.9■□□□□ 0.46
CHGBP05060 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.9■□□□□ 0.46
CHGBP05060 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CHGBP05060 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHGBP05060 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.9■□□□□ 0.46
CHGBP05060 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CHGBP05060 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHGBP05060 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.9■□□□□ 0.46
CHGBP05060 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CHGBP05060 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CHGBP05060 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CHGBP05060 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHGBP05060 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CHGBP05060 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.89■□□□□ 0.46
CHGBP05060 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHGBP05060 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHGBP05060 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.89■□□□□ 0.45
CHGBP05060 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHGBP05060 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHGBP05060 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CHGBP05060 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHGBP05060 TLE1P1-201ENST00000422965 589 ntBASIC17.89■□□□□ 0.45
CHGBP05060 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.89■□□□□ 0.45
CHGBP05060 MTX1P1-201ENST00000440904 838 ntBASIC17.89■□□□□ 0.45
CHGBP05060 Z93015.1-201ENST00000451718 390 ntBASIC17.89■□□□□ 0.45
CHGBP05060 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.89■□□□□ 0.45
CHGBP05060 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.89■□□□□ 0.45
CHGBP05060 AL136301.1-201ENST00000615830 422 ntBASIC17.89■□□□□ 0.45
CHGBP05060 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHGBP05060 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHGBP05060 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHGBP05060 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CHGBP05060 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CHGBP05060 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms