Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.14■□□□□ 0.17
CHRNA1P02708 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA1P02708 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CHRNA1P02708 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CHRNA1P02708 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.14■□□□□ 0.17
CHRNA1P02708 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.14■□□□□ 0.17
CHRNA1P02708 RN7SL555P-201ENST00000584742 339 ntBASIC16.14■□□□□ 0.17
CHRNA1P02708 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.14■□□□□ 0.17
CHRNA1P02708 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.14■□□□□ 0.17
CHRNA1P02708 AL109837.1-201ENST00000603272 613 ntBASIC16.14■□□□□ 0.17
CHRNA1P02708 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.14■□□□□ 0.17
CHRNA1P02708 MIR7845-201ENST00000618396 99 ntBASIC16.14■□□□□ 0.17
CHRNA1P02708 AC133540.1-201ENST00000620845 1019 ntBASIC16.14■□□□□ 0.17
CHRNA1P02708 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.14■□□□□ 0.17
CHRNA1P02708 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA1P02708 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.14■□□□□ 0.17
CHRNA1P02708 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
CHRNA1P02708 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CHRNA1P02708 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.14■□□□□ 0.17
CHRNA1P02708 LINC01101-201ENST00000622953 1884 ntBASIC16.14■□□□□ 0.17
CHRNA1P02708 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.14■□□□□ 0.17
CHRNA1P02708 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA1P02708 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA1P02708 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA1P02708 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA1P02708 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.14■□□□□ 0.17
CHRNA1P02708 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.13■□□□□ 0.17
CHRNA1P02708 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.13■□□□□ 0.17
CHRNA1P02708 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CHRNA1P02708 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.13■□□□□ 0.17
CHRNA1P02708 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CHRNA1P02708 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.13■□□□□ 0.17
CHRNA1P02708 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
CHRNA1P02708 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.13■□□□□ 0.17
CHRNA1P02708 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 AL627231.1-201ENST00000394467 1125 ntBASIC16.13■□□□□ 0.17
CHRNA1P02708 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.13■□□□□ 0.17
CHRNA1P02708 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.13■□□□□ 0.17
CHRNA1P02708 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
CHRNA1P02708 AC008267.1-201ENST00000474858 1069 ntBASIC16.13■□□□□ 0.17
CHRNA1P02708 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.13■□□□□ 0.17
CHRNA1P02708 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.13■□□□□ 0.17
CHRNA1P02708 IQSEC3P1-201ENST00000538799 536 ntBASIC16.13■□□□□ 0.17
CHRNA1P02708 RBM8B-201ENST00000555532 525 ntBASIC16.13■□□□□ 0.17
CHRNA1P02708 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.13■□□□□ 0.17
CHRNA1P02708 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.13■□□□□ 0.17
CHRNA1P02708 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CHRNA1P02708 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.13■□□□□ 0.17
CHRNA1P02708 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CHRNA1P02708 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 LINC00554-201ENST00000564841 3011 ntBASIC16.13■□□□□ 0.17
CHRNA1P02708 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CHRNA1P02708 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHRNA1P02708 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHRNA1P02708 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHRNA1P02708 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.12■□□□□ 0.17
CHRNA1P02708 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHRNA1P02708 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHRNA1P02708 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHRNA1P02708 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHRNA1P02708 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CHRNA1P02708 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.12■□□□□ 0.17
CHRNA1P02708 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHRNA1P02708 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHRNA1P02708 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHRNA1P02708 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CHRNA1P02708 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHRNA1P02708 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.12■□□□□ 0.17
CHRNA1P02708 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHRNA1P02708 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHRNA1P02708 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.12■□□□□ 0.17
CHRNA1P02708 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CHRNA1P02708 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.12■□□□□ 0.17
CHRNA1P02708 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHRNA1P02708 RPL17P11-201ENST00000417593 544 ntBASIC16.12■□□□□ 0.17
CHRNA1P02708 XBP1P1-201ENST00000436573 652 ntBASIC16.12■□□□□ 0.17
CHRNA1P02708 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.12■□□□□ 0.17
CHRNA1P02708 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.12■□□□□ 0.17
CHRNA1P02708 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.12■□□□□ 0.17
CHRNA1P02708 MIR6769A-201ENST00000617340 73 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms