Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.4□□□□□ -0.26
CNOT4O95628 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CNOT4O95628 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.4□□□□□ -0.26
CNOT4O95628 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.4□□□□□ -0.26
CNOT4O95628 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CNOT4O95628 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.4□□□□□ -0.26
CNOT4O95628 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.4□□□□□ -0.26
CNOT4O95628 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.4□□□□□ -0.26
CNOT4O95628 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.4□□□□□ -0.26
CNOT4O95628 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.4□□□□□ -0.26
CNOT4O95628 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.4□□□□□ -0.26
CNOT4O95628 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CNOT4O95628 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.4□□□□□ -0.26
CNOT4O95628 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.4□□□□□ -0.26
CNOT4O95628 REXO1L4P-201ENST00000605109 1937 ntBASIC13.4□□□□□ -0.26
CNOT4O95628 AC020907.1-201ENST00000616460 1350 ntBASIC13.4□□□□□ -0.26
CNOT4O95628 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.4□□□□□ -0.26
CNOT4O95628 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.4□□□□□ -0.26
CNOT4O95628 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.4□□□□□ -0.26
CNOT4O95628 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.4□□□□□ -0.26
CNOT4O95628 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CNOT4O95628 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
CNOT4O95628 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CNOT4O95628 C18orf15-201ENST00000623680 2534 ntBASIC13.4□□□□□ -0.26
CNOT4O95628 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CNOT4O95628 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CNOT4O95628 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CNOT4O95628 CICP11-201ENST00000434745 2827 ntBASIC13.4□□□□□ -0.27
CNOT4O95628 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.39□□□□□ -0.27
CNOT4O95628 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.39□□□□□ -0.27
CNOT4O95628 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.39□□□□□ -0.27
CNOT4O95628 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 AC006001.1-201ENST00000325130 474 ntBASIC13.39□□□□□ -0.27
CNOT4O95628 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
CNOT4O95628 AC099336.1-201ENST00000417053 1171 ntBASIC13.39□□□□□ -0.27
CNOT4O95628 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.39□□□□□ -0.27
CNOT4O95628 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.39□□□□□ -0.27
CNOT4O95628 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.39□□□□□ -0.27
CNOT4O95628 HLA-K-203ENST00000430151 1046 ntBASIC13.39□□□□□ -0.27
CNOT4O95628 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
CNOT4O95628 CSF2RBP1-201ENST00000447905 391 ntBASIC13.39□□□□□ -0.27
CNOT4O95628 RNA5SP412-201ENST00000516234 123 ntBASIC13.39□□□□□ -0.27
CNOT4O95628 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.39□□□□□ -0.27
CNOT4O95628 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.39□□□□□ -0.27
CNOT4O95628 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CNOT4O95628 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.39□□□□□ -0.27
CNOT4O95628 AC103810.3-201ENST00000583567 96 ntBASIC13.39□□□□□ -0.27
CNOT4O95628 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.39□□□□□ -0.27
CNOT4O95628 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CNOT4O95628 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.39□□□□□ -0.27
CNOT4O95628 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CNOT4O95628 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CNOT4O95628 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.39□□□□□ -0.27
CNOT4O95628 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.39□□□□□ -0.27
CNOT4O95628 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
CNOT4O95628 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CNOT4O95628 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
CNOT4O95628 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.39□□□□□ -0.27
CNOT4O95628 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.39□□□□□ -0.27
CNOT4O95628 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CNOT4O95628 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CNOT4O95628 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms