Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SIX6O95475 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
SIX6O95475 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
SIX6O95475 IER3-202ENST00000376377 1350 ntBASIC12.59□□□□□ -0.39
SIX6O95475 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.59□□□□□ -0.39
SIX6O95475 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.59□□□□□ -0.39
SIX6O95475 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.59□□□□□ -0.39
SIX6O95475 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.59□□□□□ -0.39
SIX6O95475 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.59□□□□□ -0.39
SIX6O95475 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.59□□□□□ -0.39
SIX6O95475 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.59□□□□□ -0.39
SIX6O95475 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.59□□□□□ -0.39
SIX6O95475 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.59□□□□□ -0.39
SIX6O95475 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
SIX6O95475 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.59□□□□□ -0.39
SIX6O95475 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.59□□□□□ -0.39
SIX6O95475 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SIX6O95475 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.59□□□□□ -0.39
SIX6O95475 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SIX6O95475 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SIX6O95475 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
SIX6O95475 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
SIX6O95475 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.58□□□□□ -0.39
SIX6O95475 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SIX6O95475 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
SIX6O95475 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 TCAM1P-207ENST00000485295 1537 ntBASIC12.58□□□□□ -0.4
SIX6O95475 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SIX6O95475 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SIX6O95475 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
SIX6O95475 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.58□□□□□ -0.4
SIX6O95475 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.58□□□□□ -0.4
SIX6O95475 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.58□□□□□ -0.4
SIX6O95475 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC12.58□□□□□ -0.4
SIX6O95475 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
SIX6O95475 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.58□□□□□ -0.4
SIX6O95475 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.58□□□□□ -0.4
SIX6O95475 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SIX6O95475 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.58□□□□□ -0.4
SIX6O95475 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.58□□□□□ -0.4
SIX6O95475 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.58□□□□□ -0.4
SIX6O95475 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.58□□□□□ -0.4
SIX6O95475 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.58□□□□□ -0.4
SIX6O95475 AC073389.1-201ENST00000595595 795 ntBASIC12.58□□□□□ -0.4
SIX6O95475 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
SIX6O95475 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
SIX6O95475 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.58□□□□□ -0.4
SIX6O95475 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
SIX6O95475 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
SIX6O95475 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SIX6O95475 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.58□□□□□ -0.4
SIX6O95475 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SIX6O95475 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms