Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RFPL1O75677 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFPL1O75677 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.08■□□□□ 0
RFPL1O75677 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFPL1O75677 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RFPL1O75677 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RFPL1O75677 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFPL1O75677 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.08■□□□□ 0
RFPL1O75677 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.07■□□□□ 0
RFPL1O75677 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.07■□□□□ 0
RFPL1O75677 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.07■□□□□ 0
RFPL1O75677 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RFPL1O75677 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RFPL1O75677 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RFPL1O75677 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.07■□□□□ 0
RFPL1O75677 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.07■□□□□ 0
RFPL1O75677 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.07■□□□□ 0
RFPL1O75677 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.07■□□□□ 0
RFPL1O75677 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RFPL1O75677 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RFPL1O75677 RAB43P1-201ENST00000561790 589 ntBASIC15.07■□□□□ 0
RFPL1O75677 AC106886.1-201ENST00000568660 600 ntBASIC15.07■□□□□ 0
RFPL1O75677 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.07■□□□□ 0
RFPL1O75677 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.07■□□□□ 0
RFPL1O75677 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.07■□□□□ 0
RFPL1O75677 AL158212.4-201ENST00000624062 1286 ntBASIC15.07■□□□□ 0
RFPL1O75677 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.07■□□□□ 0
RFPL1O75677 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.07■□□□□ 0
RFPL1O75677 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RFPL1O75677 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.07■□□□□ 0
RFPL1O75677 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 AL161772.1-201ENST00000610494 4412 ntBASIC15.07■□□□□ 0
RFPL1O75677 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.07■□□□□ 0
RFPL1O75677 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.07■□□□□ 0
RFPL1O75677 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.07■□□□□ 0
RFPL1O75677 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
RFPL1O75677 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFPL1O75677 AL158070.2-201ENST00000623713 1621 ntBASIC15.06■□□□□ 0
RFPL1O75677 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFPL1O75677 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
RFPL1O75677 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.06■□□□□ 0
RFPL1O75677 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RFPL1O75677 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RFPL1O75677 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFPL1O75677 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.06■□□□□ 0
RFPL1O75677 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.06■□□□□ 0
RFPL1O75677 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RFPL1O75677 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.06■□□□□ 0
RFPL1O75677 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RFPL1O75677 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFPL1O75677 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
RFPL1O75677 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFPL1O75677 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.06■□□□□ 0
RFPL1O75677 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFPL1O75677 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFPL1O75677 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.06■□□□□ 0
RFPL1O75677 MIR1909-201ENST00000411312 80 ntBASIC15.06■□□□□ 0
RFPL1O75677 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.06■□□□□ 0
RFPL1O75677 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.06■□□□□ 0
RFPL1O75677 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.06■□□□□ 0
RFPL1O75677 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.06■□□□□ 0
RFPL1O75677 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.06■□□□□ 0
RFPL1O75677 TPRX2P-201ENST00000535362 881 ntBASIC15.06■□□□□ 0
RFPL1O75677 KRT17P8-201ENST00000540749 863 ntBASIC15.06■□□□□ 0
RFPL1O75677 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.06■□□□□ 0
RFPL1O75677 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.06■□□□□ 0
RFPL1O75677 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.06■□□□□ 0
RFPL1O75677 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
RFPL1O75677 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFPL1O75677 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFPL1O75677 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
RFPL1O75677 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.06■□□□□ 0
RFPL1O75677 KRT8P14-201ENST00000414254 1442 ntBASIC15.06■□□□□ 0
RFPL1O75677 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RFPL1O75677 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.06■□□□□ 0
RFPL1O75677 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFPL1O75677 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RFPL1O75677 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.06■□□□□ 0
RFPL1O75677 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RFPL1O75677 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RFPL1O75677 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms