Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CACNA1FO60840 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.44■□□□□ 0.54
CACNA1FO60840 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC18.44■□□□□ 0.54
CACNA1FO60840 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC18.44■□□□□ 0.54
CACNA1FO60840 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.44■□□□□ 0.54
CACNA1FO60840 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CACNA1FO60840 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CACNA1FO60840 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.44■□□□□ 0.54
CACNA1FO60840 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC18.44■□□□□ 0.54
CACNA1FO60840 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CACNA1FO60840 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CACNA1FO60840 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CACNA1FO60840 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC18.44■□□□□ 0.54
CACNA1FO60840 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
CACNA1FO60840 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CACNA1FO60840 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CACNA1FO60840 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CACNA1FO60840 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CACNA1FO60840 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CACNA1FO60840 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CACNA1FO60840 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CACNA1FO60840 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.44■□□□□ 0.54
CACNA1FO60840 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CACNA1FO60840 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.44■□□□□ 0.54
CACNA1FO60840 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CACNA1FO60840 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC18.44■□□□□ 0.54
CACNA1FO60840 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.44■□□□□ 0.54
CACNA1FO60840 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.44■□□□□ 0.54
CACNA1FO60840 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CACNA1FO60840 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC18.44■□□□□ 0.54
CACNA1FO60840 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CACNA1FO60840 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CACNA1FO60840 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18.44■□□□□ 0.54
CACNA1FO60840 AC091812.3-201ENST00000621362 345 ntBASIC18.44■□□□□ 0.54
CACNA1FO60840 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.44■□□□□ 0.54
CACNA1FO60840 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
CACNA1FO60840 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC18.43■□□□□ 0.54
CACNA1FO60840 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA1FO60840 AP002353.1-201ENST00000528257 1599 ntBASIC18.43■□□□□ 0.54
CACNA1FO60840 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC18.43■□□□□ 0.54
CACNA1FO60840 AL133338.1-201ENST00000565695 1517 ntBASIC18.43■□□□□ 0.54
CACNA1FO60840 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC18.43■□□□□ 0.54
CACNA1FO60840 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA1FO60840 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.43■□□□□ 0.54
CACNA1FO60840 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA1FO60840 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC18.43■□□□□ 0.54
CACNA1FO60840 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC18.43■□□□□ 0.54
CACNA1FO60840 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CACNA1FO60840 KLK3-207ENST00000595952 969 ntTSL 3 BASIC18.43■□□□□ 0.54
CACNA1FO60840 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA1FO60840 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA1FO60840 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC18.43■□□□□ 0.54
CACNA1FO60840 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA1FO60840 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.43■□□□□ 0.54
CACNA1FO60840 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CACNA1FO60840 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA1FO60840 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA1FO60840 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA1FO60840 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA1FO60840 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.43■□□□□ 0.54
CACNA1FO60840 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA1FO60840 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC18.43■□□□□ 0.54
CACNA1FO60840 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA1FO60840 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CACNA1FO60840 RPS9P1-201ENST00000419943 583 ntBASIC18.42■□□□□ 0.54
CACNA1FO60840 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.42■□□□□ 0.54
CACNA1FO60840 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC18.42■□□□□ 0.54
CACNA1FO60840 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC18.42■□□□□ 0.54
CACNA1FO60840 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
CACNA1FO60840 AL161670.2-201ENST00000557650 1227 ntBASIC18.42■□□□□ 0.54
CACNA1FO60840 RN7SL163P-201ENST00000583100 276 ntBASIC18.42■□□□□ 0.54
CACNA1FO60840 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1FO60840 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1FO60840 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC18.42■□□□□ 0.54
CACNA1FO60840 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1FO60840 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1FO60840 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1FO60840 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1FO60840 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CACNA1FO60840 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1FO60840 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1FO60840 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1FO60840 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1FO60840 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1FO60840 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CACNA1FO60840 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.42■□□□□ 0.54
CACNA1FO60840 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CACNA1FO60840 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1FO60840 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.42■□□□□ 0.54
CACNA1FO60840 AC005077.2-201ENST00000449786 690 ntBASIC18.42■□□□□ 0.54
CACNA1FO60840 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC18.42■□□□□ 0.54
CACNA1FO60840 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.42■□□□□ 0.54
CACNA1FO60840 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC18.42■□□□□ 0.54
CACNA1FO60840 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC18.42■□□□□ 0.54
CACNA1FO60840 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1FO60840 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1FO60840 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1FO60840 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1FO60840 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
CACNA1FO60840 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms