Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
XRCC2O43543 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.1□□□□□ -0.31
XRCC2O43543 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.1□□□□□ -0.31
XRCC2O43543 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.1□□□□□ -0.31
XRCC2O43543 AC005840.4-201ENST00000541242 2494 ntBASIC13.1□□□□□ -0.31
XRCC2O43543 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.1□□□□□ -0.31
XRCC2O43543 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
XRCC2O43543 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.1□□□□□ -0.31
XRCC2O43543 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
XRCC2O43543 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 PIN1P1-201ENST00000412108 996 ntBASIC13.1□□□□□ -0.31
XRCC2O43543 BCRP1-201ENST00000444246 691 ntBASIC13.1□□□□□ -0.31
XRCC2O43543 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.1□□□□□ -0.31
XRCC2O43543 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.1□□□□□ -0.31
XRCC2O43543 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
XRCC2O43543 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.1□□□□□ -0.31
XRCC2O43543 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.1□□□□□ -0.31
XRCC2O43543 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.1□□□□□ -0.31
XRCC2O43543 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.1□□□□□ -0.31
XRCC2O43543 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.1□□□□□ -0.31
XRCC2O43543 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
XRCC2O43543 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
XRCC2O43543 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.1□□□□□ -0.31
XRCC2O43543 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
XRCC2O43543 GRK6P1-201ENST00000400595 1711 ntBASIC13.1□□□□□ -0.31
XRCC2O43543 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.1□□□□□ -0.31
XRCC2O43543 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
XRCC2O43543 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
XRCC2O43543 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.1□□□□□ -0.31
XRCC2O43543 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.1□□□□□ -0.31
XRCC2O43543 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
XRCC2O43543 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.09□□□□□ -0.31
XRCC2O43543 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.09□□□□□ -0.31
XRCC2O43543 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.09□□□□□ -0.31
XRCC2O43543 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.09□□□□□ -0.31
XRCC2O43543 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.09□□□□□ -0.31
XRCC2O43543 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.09□□□□□ -0.31
XRCC2O43543 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.09□□□□□ -0.31
XRCC2O43543 RNU1-114P-201ENST00000365297 166 ntBASIC13.09□□□□□ -0.31
XRCC2O43543 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.09□□□□□ -0.31
XRCC2O43543 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
XRCC2O43543 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.09□□□□□ -0.31
XRCC2O43543 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.09□□□□□ -0.31
XRCC2O43543 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.09□□□□□ -0.31
XRCC2O43543 KRT18P25-201ENST00000508931 1278 ntBASIC13.09□□□□□ -0.31
XRCC2O43543 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
XRCC2O43543 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.09□□□□□ -0.31
XRCC2O43543 DUX4L47-201ENST00000566374 394 ntBASIC13.09□□□□□ -0.31
XRCC2O43543 AC140912.1-201ENST00000577171 1054 ntBASIC13.09□□□□□ -0.31
XRCC2O43543 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.09□□□□□ -0.31
XRCC2O43543 AP005019.2-201ENST00000615104 511 ntBASIC13.09□□□□□ -0.31
XRCC2O43543 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.09□□□□□ -0.31
XRCC2O43543 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
XRCC2O43543 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.09□□□□□ -0.31
XRCC2O43543 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
XRCC2O43543 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.08□□□□□ -0.31
XRCC2O43543 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
XRCC2O43543 LRRC59-203ENST00000576448 1531 ntBASIC13.08□□□□□ -0.31
XRCC2O43543 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
XRCC2O43543 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.08□□□□□ -0.32
XRCC2O43543 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.08□□□□□ -0.32
XRCC2O43543 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
XRCC2O43543 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms