Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.18□□□□□ -0.14
CLIC1O00299 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLIC1O00299 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLIC1O00299 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLIC1O00299 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.18□□□□□ -0.14
CLIC1O00299 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.18□□□□□ -0.14
CLIC1O00299 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.18□□□□□ -0.14
CLIC1O00299 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.18□□□□□ -0.14
CLIC1O00299 RN7SL399P-201ENST00000471648 279 ntBASIC14.18□□□□□ -0.14
CLIC1O00299 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLIC1O00299 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.18□□□□□ -0.14
CLIC1O00299 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.18□□□□□ -0.14
CLIC1O00299 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CLIC1O00299 AC093813.1-201ENST00000605066 256 ntBASIC14.18□□□□□ -0.14
CLIC1O00299 AC004840.1-201ENST00000636359 365 ntBASIC14.18□□□□□ -0.14
CLIC1O00299 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.18□□□□□ -0.14
CLIC1O00299 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLIC1O00299 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.18□□□□□ -0.14
CLIC1O00299 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.18□□□□□ -0.14
CLIC1O00299 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLIC1O00299 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLIC1O00299 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLIC1O00299 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLIC1O00299 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
CLIC1O00299 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLIC1O00299 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLIC1O00299 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLIC1O00299 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLIC1O00299 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CLIC1O00299 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.18□□□□□ -0.14
CLIC1O00299 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CLIC1O00299 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CLIC1O00299 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.17□□□□□ -0.14
CLIC1O00299 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.17□□□□□ -0.14
CLIC1O00299 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CLIC1O00299 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CLIC1O00299 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CLIC1O00299 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.17□□□□□ -0.14
CLIC1O00299 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.17□□□□□ -0.14
CLIC1O00299 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.17□□□□□ -0.14
CLIC1O00299 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
CLIC1O00299 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.17□□□□□ -0.14
CLIC1O00299 VDAC1P7-201ENST00000462417 847 ntBASIC14.17□□□□□ -0.14
CLIC1O00299 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.17□□□□□ -0.14
CLIC1O00299 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.17□□□□□ -0.14
CLIC1O00299 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.17□□□□□ -0.14
CLIC1O00299 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.17□□□□□ -0.14
CLIC1O00299 AC008738.7-201ENST00000609744 511 ntBASIC14.17□□□□□ -0.14
CLIC1O00299 AL662799.1-202ENST00000614205 422 ntBASIC14.17□□□□□ -0.14
CLIC1O00299 AL691403.2-201ENST00000618460 490 ntBASIC14.17□□□□□ -0.14
CLIC1O00299 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.17□□□□□ -0.14
CLIC1O00299 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CLIC1O00299 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
CLIC1O00299 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.17□□□□□ -0.14
CLIC1O00299 AL359881.3-201ENST00000602640 1721 ntBASIC14.17□□□□□ -0.14
CLIC1O00299 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.17□□□□□ -0.14
CLIC1O00299 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CLIC1O00299 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.17□□□□□ -0.14
CLIC1O00299 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CLIC1O00299 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLIC1O00299 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.16□□□□□ -0.14
CLIC1O00299 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.16□□□□□ -0.14
CLIC1O00299 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 MIR1233-2-201ENST00000408138 82 ntBASIC14.16□□□□□ -0.14
CLIC1O00299 MIR1233-1-201ENST00000408722 82 ntBASIC14.16□□□□□ -0.14
CLIC1O00299 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.16□□□□□ -0.14
CLIC1O00299 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.16□□□□□ -0.14
CLIC1O00299 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 RPL13AP25-201ENST00000484130 612 ntBASIC14.16□□□□□ -0.14
CLIC1O00299 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.16□□□□□ -0.14
CLIC1O00299 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.16□□□□□ -0.14
CLIC1O00299 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms