Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 AL359845.1-201ENST00000458202 1648 ntBASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 POM121L6P-201ENST00000441186 1826 ntBASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 AC009093.2-202ENST00000620513 2079 ntBASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 CNOT4-203ENST00000361528 2215 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 WARS-203ENST00000358655 2466 ntTSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 ARMCX2-203ENST00000356824 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 PES1-203ENST00000402281 2760 ntTSL 2 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 LINC00982-205ENST00000420957 435 ntBASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 NUS1P1-201ENST00000446295 882 ntBASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 AC011506.1-201ENST00000474329 610 ntBASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 PNMA6B-201ENST00000538162 1200 ntBASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 SMCR5-201ENST00000543475 2844 ntBASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms