Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDC42BPBQ9Y5S2 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDC42BPBQ9Y5S2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CDC42BPBQ9Y5S2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CDC42BPBQ9Y5S2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CDC42BPBQ9Y5S2 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDC42BPBQ9Y5S2 RPL3P2-204ENST00000413027 1203 ntBASIC21.89■■□□□ 1.1
CDC42BPBQ9Y5S2 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CDC42BPBQ9Y5S2 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDC42BPBQ9Y5S2 AC244197.1-201ENST00000456494 951 ntBASIC21.89■■□□□ 1.1
CDC42BPBQ9Y5S2 RPS23-207ENST00000511844 530 ntTSL 2 BASIC21.89■■□□□ 1.1
CDC42BPBQ9Y5S2 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC21.89■■□□□ 1.1
CDC42BPBQ9Y5S2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDC42BPBQ9Y5S2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDC42BPBQ9Y5S2 AC138035.3-201ENST00000622706 2791 ntBASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 RNVU1-8-201ENST00000364272 125 ntBASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 RPL35P9-201ENST00000446059 350 ntBASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 RN7SL23P-201ENST00000484055 275 ntBASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 AC013553.1-201ENST00000560906 267 ntBASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 COX5A-205ENST00000568517 582 ntTSL 3 BASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 AC021016.3-201ENST00000608367 477 ntBASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDC42BPBQ9Y5S2 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 AL109954.1-202ENST00000564051 2148 ntBASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 CMC2-204ENST00000562713 573 ntTSL 3 BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 CMC2-209ENST00000565108 399 ntTSL 2 BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CDC42BPBQ9Y5S2 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 SURF4-203ENST00000371991 715 ntTSL 3 BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 LINC00265-2P-201ENST00000413372 782 ntBASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 AC006529.1-201ENST00000459978 637 ntBASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 RNA5SP406-201ENST00000516106 112 ntBASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 AC027139.1-201ENST00000565286 951 ntBASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 LINC00244-201ENST00000625073 613 ntBASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CDC42BPBQ9Y5S2 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms