Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 C2orf27AP3-201ENST00000434123 579 ntBASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 DUX4L47-201ENST00000566374 394 ntBASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 AL354718.3-201ENST00000616414 581 ntBASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 CR382287.1-201ENST00000623954 586 ntBASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
PCDHB1Q9Y5F3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
PCDHB1Q9Y5F3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHB1Q9Y5F3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHB1Q9Y5F3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.02□□□□□ -0.01
PCDHB1Q9Y5F3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHB1Q9Y5F3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHB1Q9Y5F3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHB1Q9Y5F3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHB1Q9Y5F3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
PCDHB1Q9Y5F3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHB1Q9Y5F3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.02□□□□□ -0.01
PCDHB1Q9Y5F3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
PCDHB1Q9Y5F3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHB1Q9Y5F3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHB1Q9Y5F3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.02□□□□□ -0.01
PCDHB1Q9Y5F3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHB1Q9Y5F3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 KLF2P2-201ENST00000416807 1039 ntBASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 KRT8P13-201ENST00000463294 1010 ntBASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 CICP14-201ENST00000629111 2732 ntBASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 AC018442.1-201ENST00000421439 2061 ntBASIC15.01□□□□□ -0.01
PCDHB1Q9Y5F3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 KRT18P25-201ENST00000508931 1278 ntBASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms