Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 AL662890.1-201ENST00000396818 632 ntBASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 IGHJ2P-201ENST00000454480 60 ntBASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.17■□□□□ 0.18
SSX2IPQ9Y2D8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSX2IPQ9Y2D8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 AC104457.1-201ENST00000401024 814 ntBASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 AL136309.1-201ENST00000403917 691 ntBASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 AC005077.2-201ENST00000449786 690 ntBASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 NDUFV2P1-201ENST00000596415 907 ntBASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 248.7 ms