Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 C2orf27AP3-201ENST00000434123 579 ntBASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 AC106760.1-201ENST00000508690 800 ntBASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 AC005225.4-201ENST00000557330 545 ntBASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 BTNL10-201ENST00000595971 695 ntBASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 LINC02084-201ENST00000606069 1096 ntBASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 AL354718.3-201ENST00000616414 581 ntBASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 IGHV3-72-202ENST00000621503 303 ntBASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 ENPP7P14-201ENST00000621765 1040 ntBASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 CR382287.1-201ENST00000623954 586 ntBASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 AC232323.1-201ENST00000540724 2099 ntBASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 MTHFR-210ENST00000641407 2387 ntBASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBQLN4Q9NRR5 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 SALL4P5-201ENST00000419001 1760 ntBASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 AC067750.1-201ENST00000608826 6545 ntBASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 USP32P1-208ENST00000506594 1164 ntBASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBQLN4Q9NRR5 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms