Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 AC027796.2-201ENST00000575326 344 ntBASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 AC093726.1-201ENST00000608064 963 ntBASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 BX539320.1-201ENST00000623759 877 ntBASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 AC093525.8-201ENST00000624099 1342 ntBASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 AL390755.1-201ENST00000623716 2027 ntBASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 AL391825.1-201ENST00000457671 1364 ntBASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 AC087499.6-201ENST00000411576 835 ntBASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 BRI3BPP1-201ENST00000594224 787 ntBASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 AC007431.3-201ENST00000623221 587 ntBASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 AL157414.3-201ENST00000624276 1954 ntBASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC68Q9H2F9 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 C1QBPP1-201ENST00000400117 770 ntBASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms