Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 AC239868.1-201ENST00000369385 493 ntBASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 AC026803.1-201ENST00000569130 274 ntBASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 MIR4683-201ENST00000579659 81 ntBASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2OQ9C0C9 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 AC104581.4-201ENST00000623126 3052 ntBASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 LINC02447-202ENST00000501888 2146 ntBASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 AC130709.1-201ENST00000484779 1212 ntBASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 MIR4783-201ENST00000580343 82 ntBASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 RPL17P45-201ENST00000586289 509 ntBASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 AC008805.1-201ENST00000590892 364 ntBASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 AC009955.4-201ENST00000597192 544 ntBASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 AC005632.3-201ENST00000605544 308 ntBASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2OQ9C0C9 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 CLUHP2-201ENST00000426660 1303 ntBASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms