Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 AC007191.1-201ENST00000623179 2995 ntBASIC13.87□□□□□ -0.19
TRIM2Q9C040 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 AC023908.3-201ENST00000564211 3047 ntBASIC13.87□□□□□ -0.19
TRIM2Q9C040 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRIM2Q9C040 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRIM2Q9C040 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 AC005912.2-201ENST00000619492 2400 ntBASIC13.86□□□□□ -0.19
TRIM2Q9C040 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 AL391825.1-201ENST00000457671 1364 ntBASIC13.86□□□□□ -0.19
TRIM2Q9C040 AC113367.3-201ENST00000508316 1912 ntBASIC13.86□□□□□ -0.19
TRIM2Q9C040 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 AL139094.1-201ENST00000405549 1188 ntBASIC13.86□□□□□ -0.19
TRIM2Q9C040 AL442647.2-201ENST00000429864 857 ntBASIC13.86□□□□□ -0.19
TRIM2Q9C040 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 AC093726.1-201ENST00000608064 963 ntBASIC13.86□□□□□ -0.19
TRIM2Q9C040 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TRIM2Q9C040 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRIM2Q9C040 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM2Q9C040 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.85□□□□□ -0.19
TRIM2Q9C040 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms