Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 LINC01230-201ENST00000625222 3017 ntBASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 AL589987.1-201ENST00000453380 819 ntBASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 SDHAP3-202ENST00000515467 728 ntBASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 AC055876.2-201ENST00000531834 546 ntBASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 AC023310.3-201ENST00000557027 670 ntBASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 AC100756.1-201ENST00000562736 682 ntBASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 AC138749.3-201ENST00000567691 622 ntBASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 LINC01115-203ENST00000606068 577 ntBASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 AC116165.1-201ENST00000611806 668 ntBASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 AC011495.1-201ENST00000498085 584 ntBASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXP3Q9BZS1 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 AC104581.4-201ENST00000623126 3052 ntBASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms