Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 CICP20-201ENST00000443330 2801 ntBASIC14.49□□□□□ -0.09
VPS33AQ96AX1 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
VPS33AQ96AX1 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 AL137783.1-201ENST00000623494 1896 ntBASIC14.48□□□□□ -0.09
VPS33AQ96AX1 AC023090.2-201ENST00000625182 2110 ntBASIC14.48□□□□□ -0.09
VPS33AQ96AX1 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 TPT1P11-201ENST00000458482 498 ntBASIC14.48□□□□□ -0.09
VPS33AQ96AX1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS33AQ96AX1 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 AC004066.1-201ENST00000502488 802 ntBASIC14.47□□□□□ -0.09
VPS33AQ96AX1 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 AC044860.1-202ENST00000559481 777 ntBASIC14.47□□□□□ -0.09
VPS33AQ96AX1 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms