Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 AC015910.1-201ENST00000579400 975 ntBASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 LINC01115-203ENST00000606068 577 ntBASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.71□□□□□ -0.37
RTN4IP1Q8WWV3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 AL031595.1-201ENST00000623969 4709 ntBASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RTN4IP1Q8WWV3 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 AC131212.3-201ENST00000624087 4219 ntBASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 BASP1P1-201ENST00000430708 665 ntBASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 KRT18P64-201ENST00000434946 1219 ntBASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 AC009477.1-201ENST00000452936 217 ntBASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 AF228730.6-201ENST00000641497 218 ntBASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 AL645728.2-202ENST00000641679 227 ntBASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 AC084121.3-201ENST00000641716 218 ntBASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms