Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 AC018529.2-202ENST00000611482 3087 ntBASIC13.18□□□□□ -0.3
CPEB3Q8NE35 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 AC067750.1-201ENST00000608826 6545 ntBASIC13.18□□□□□ -0.3
CPEB3Q8NE35 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CPEB3Q8NE35 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 AC015936.2-201ENST00000593177 259 ntBASIC13.17□□□□□ -0.3
CPEB3Q8NE35 AC008735.3-201ENST00000596646 500 ntBASIC13.17□□□□□ -0.3
CPEB3Q8NE35 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 AL365209.1-201ENST00000624418 6473 ntBASIC13.17□□□□□ -0.3
CPEB3Q8NE35 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPEB3Q8NE35 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms