Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
NANOGP1Q8N7R0 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
NANOGP1Q8N7R0 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.4□□□□□ -0.26
NANOGP1Q8N7R0 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NANOGP1Q8N7R0 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NANOGP1Q8N7R0 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.4□□□□□ -0.26
NANOGP1Q8N7R0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.4□□□□□ -0.26
NANOGP1Q8N7R0 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NANOGP1Q8N7R0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.4□□□□□ -0.26
NANOGP1Q8N7R0 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NANOGP1Q8N7R0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.4□□□□□ -0.26
NANOGP1Q8N7R0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NANOGP1Q8N7R0 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NANOGP1Q8N7R0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NANOGP1Q8N7R0 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 CR383656.2-201ENST00000548656 2254 ntBASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 MYADML-201ENST00000474610 2147 ntBASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 AC005562.1-201ENST00000583030 3219 ntBASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 KRT18P3-201ENST00000451602 1288 ntBASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 AL033527.5-202ENST00000641632 1098 ntBASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NANOGP1Q8N7R0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 AC111170.3-201ENST00000624282 2464 ntBASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 MIR1224-201ENST00000408193 85 ntBASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 AC090643.2-201ENST00000623442 2029 ntBASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NANOGP1Q8N7R0 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms